RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 ZNF575Q86XF7 245 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 FAM89BQ8N5H3 189 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 MAPKAPK5-AS1Q8N8E1 139 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 GGHQ92820 318 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 CMSS1Q9BQ75 279 aaKnown RBP10.94□□□□□ -0.66
NELFE-204ENST00000436289 NICN1Q9BSH3 213 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 DCUN1D5Q9BTE7 237 aa10.94□□□□□ -0.66
NELFE-204ENST00000436289 TMEM14DPA8MWL7 114 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 LALBAP00709 142 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 IL6RP08887 468 aaPredicted RBP10.93□□□□□ -0.66
NELFE-204ENST00000436289 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.66
NELFE-204ENST00000436289 HLA-DMBP28068 263 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 ARFRP1Q13795 201 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 C10orf55Q5SWW7 151 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 SLC7A6OSQ96CW6 309 aaPredicted RBP10.93□□□□□ -0.66
NELFE-204ENST00000436289 OR2A7Q96R45 310 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
NELFE-204ENST00000436289 DIMT1Q9UNQ2 313 aaKnown RBP10.93□□□□□ -0.66
NELFE-204ENST00000436289 PRELID3BQ9Y3B1 194 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 S4R3C0 116 aa10.93□□□□□ -0.66
NELFE-204ENST00000436289 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 TRBV6-7A0A0A0MS04 114 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 M0R2N4 97 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 EI24O14681 340 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 DEFB4AO15263 64 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 FABP7O15540 132 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 CYB5BO43169 146 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 S1PR2O95136 353 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 AMBPP02760 352 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 GPR183P32249 361 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 PSMD7P51665 324 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 MRPS15P82914 257 aaKnown RBP10.92□□□□□ -0.66
NELFE-204ENST00000436289 UNC119Q13432 240 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 TMEM41BQ5BJD5 291 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
NELFE-204ENST00000436289 MRPS7Q9Y2R9 242 aaKnown RBP10.92□□□□□ -0.66
NELFE-204ENST00000436289 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 LINC00473A8K010 186 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 NDUFA4O00483 81 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 BET1O15155 118 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 SOCS1O15524 211 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 CA1P00915 261 aaPredicted RBP10.91□□□□□ -0.66
NELFE-204ENST00000436289 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
NELFE-204ENST00000436289 MIFP14174 115 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 CELP19835 753 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 RANBP1P43487 201 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 QRFPP83859 136 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 C1orf146Q5VVC0 180 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 SPSB3Q6PJ21 355 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 TMEM167AQ8TBQ9 72 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 PHYHIPQ92561 330 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 CABLES2Q9BTV7 478 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 LPAR5Q9H1C0 372 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 HERC1Q15751 4861 aa10.91□□□□□ -0.66
NELFE-204ENST00000436289 LOC100130705A0A1B0GUX0 176 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 TGOLN2O43493 480 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 FCGR3BO75015 233 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 SLC22A5O76082 557 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 KBTBD11O94819 623 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 CD5P06127 495 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 CDK1P06493 297 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 CD37P11049 281 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 AREGP15514 252 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 Q6ZTC4 211 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 Q8N1X5 172 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 ZFP41Q8N8Y5 198 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 Q8NAQ8 132 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 OR6M1Q8NGM8 313 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 VN1R17PQ8TDU5 208 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 GINS4Q9BRT9 223 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
NELFE-204ENST00000436289 ETV7Q9Y603 341 aa10.9□□□□□ -0.66
NELFE-204ENST00000436289 HSPG2P98160 4391 aa10.9□□□□□ -0.67
NELFE-204ENST00000436289 A0A0A6YYD4 124 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 IGHV3-35A0A0C4DH35 117 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 IFNA10P01566 189 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 IFNA21P01568 189 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 IFNA17P01571 189 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 Q6ZR54 194 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 SSX9Q7RTT3 188 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 ZNF485Q8NCK3 441 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 APH1BQ8WW43 257 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 BSCL2Q96G97 398 aaPredicted RBP10.89□□□□□ -0.67
NELFE-204ENST00000436289 TMEM80Q96HE8 168 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 CMTM3Q96MX0 182 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
NELFE-204ENST00000436289 AIFM2Q9BRQ8 373 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
NELFE-204ENST00000436289 DEFB131BA0A096LNP1 70 aa10.88□□□□□ -0.67
NELFE-204ENST00000436289 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms