RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 RPL22L1Q6P5R6 122 aaKnown RBP4.55□□□□□ -1.68
RFC3-202ENST00000434425 IL34Q6ZMJ4 242 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 CHMP1BQ7LBR1 199 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 CBLN2Q8IUK8 224 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 GPR135Q8IZ08 494 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 ZNF433Q8N7K0 673 aaPredicted RBP4.55□□□□□ -1.68
RFC3-202ENST00000434425 SYT8Q8NBV8 401 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 OR51A2Q8NGJ7 313 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 DLX4Q92988 240 aaPredicted RBP4.55□□□□□ -1.68
RFC3-202ENST00000434425 SLC35E1Q96K37 410 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 NPFFR1Q9GZQ6 430 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 IFI27L2Q9H2X8 130 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 SH2D2AQ9NP31 389 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 NDUFB11Q9NX14 153 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 COMMD9Q9P000 198 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 HEATR5BQ9P2D3 2071 aa4.55□□□□□ -1.68
RFC3-202ENST00000434425 NINQ8N4C6 2090 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR5B21A6NL26 309 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 INMT-MINDY4F8WBC2 141 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 K7EMT4 169 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 SAP18O00422 153 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 HOXA3O43365 443 aaPredicted RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 CXCL13O43927 109 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 SCRG1O75711 98 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 MYL9P24844 172 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 SOX3P41225 446 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 CRISP3P54108 245 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR12D2P58182 307 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 DEFA1P59665 94 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 DEFA3P59666 94 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 RPS25P62851 125 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 LTBQ06643 244 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 PRDX1Q06830 199 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 GAGE13Q4V321 117 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 SPATA31B1PQ5VZV4 182 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR4C11Q6IEV9 310 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 SLC18B1Q6NT16 456 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 ARL9Q6T311 187 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 APOOLQ6UXV4 268 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 Q6ZRG5 221 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 C9orf139Q6ZV77 190 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 RAB42Q8N4Z0 105 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 LRTM2Q8N967 370 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 MORN4Q8NDC4 146 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR11H6Q8NGC7 330 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR52E2Q8NGJ4 325 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 ZNF501Q96CX3 271 aaPredicted RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 OR2J1Q9GZK6 312 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 POLR2J3Q9H1A7 115 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 ZNF442Q9H7R0 627 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 ELL3Q9HB65 397 aaPredicted RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 ACKR4Q9NPB9 350 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 NTMQ9P121 344 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 BOKQ9UMX3 212 aaPredicted RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 HDGFL3Q9Y3E1 203 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 WIPI2Q9Y4P8 454 aa4.54□□□□□ -1.68
RFC3-202ENST00000434425 ANKHD1Q8IWZ3 2542 aaKnown RBP4.54□□□□□ -1.68
RFC3-202ENST00000434425 SNRNP200O75643 2136 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 ZNF207O43670 478 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 NDUFB4O95168 129 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 NDUFB8O95169 186 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 LYPD3O95274 346 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 EPPINO95925 133 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 SCTP09683 121 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 IFI6P09912 130 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 SPNP16150 400 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GNB3P16520 340 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 ZNF708P17019 499 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 CNTFRP26992 372 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GABRA3P34903 492 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 G6PCP35575 357 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 RPL4P36578 427 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 GALR1P47211 349 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
RFC3-202ENST00000434425 UBE2V2Q15819 145 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GLYATL3Q5SZD4 288 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 IGFL3Q6UXB1 125 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GOLT1AQ6ZVE7 132 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 Q75L30 129 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 PPP1R27Q86WC6 154 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 HOGA1Q86XE5 327 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 CMTM4Q8IZR5 234 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GAPTQ8N292 157 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 LINC01555Q8NAE3 123 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 PLPP5Q8NEB5 264 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 OR4K5Q8NGD3 323 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 OR2A1Q8NGT9 310 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 OR2T4Q8NH00 348 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 OR51Q1Q8NH59 317 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 GPR148Q8TDV2 347 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 HYLS1Q96M11 299 aa4.53□□□□□ -1.68
RFC3-202ENST00000434425 MCHR1Q99705 422 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms