RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 FAM223BA6NKX1 122 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 KBTBD11O94819 623 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 OR2A4O95047 310 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 ZNF735P0CB33 412 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 FCGR2CP31995 323 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 IDNKQ5T6J7 187 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-203ENST00000430038 SSX9Q7RTT3 188 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 HOGA1Q86XE5 327 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 FAM223AQ8IWN6 122 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 OR2A7Q96R45 310 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
CPSF4-203ENST00000430038 LOC100506127A0A0U1RQW1 187 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 H0Y980 276 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 OR2C1O95371 312 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 CD36P16671 472 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-203ENST00000430038 ZFAND6Q6FIF0 208 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 SGPP2Q8IWX5 399 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 SECTM1Q8WVN6 248 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
CPSF4-203ENST00000430038 HSD17B10Q99714 261 aaKnown RBP12.91□□□□□ -0.34
CPSF4-203ENST00000430038 WFDC10AQ9H1F0 79 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 AUNIPQ9H7T9 357 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 RETNQ9HD89 108 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 SLC2A9Q9NRM0 540 aa12.91□□□□□ -0.34
CPSF4-203ENST00000430038 EPPK1P58107 5090 aaKnown RBP12.91□□□□□ -0.34
CPSF4-203ENST00000430038 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 SLC22A5O76082 557 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 REG1AP05451 166 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 CD7P09564 240 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 RPL27AP46776 148 aaKnown RBP12.9□□□□□ -0.34
CPSF4-203ENST00000430038 NEDD8Q15843 81 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 KLK9Q2XQG4 91 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 OR4S2Q8NH73 311 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 FBXL7Q9UJT9 491 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
CPSF4-203ENST00000430038 NPIPB5A8MRT5 1133 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 ACTL6BO94805 426 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 PPYP01298 95 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 CRYGCP07315 174 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 LYL1P12980 280 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 ZNF66Q6ZN08 573 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 Q8N402 240 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 CACNG8Q8WXS5 425 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 ZNF257Q9Y2Q1 563 aa12.89□□□□□ -0.35
CPSF4-203ENST00000430038 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
CPSF4-203ENST00000430038 C2orf70A6NJV1 201 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 SULT1C2O00338 296 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 SCGNO76038 276 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 CTRB1P17538 263 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 PSMB6P28072 239 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 OR4A47Q6IF82 309 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
CPSF4-203ENST00000430038 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
CPSF4-203ENST00000430038 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
CPSF4-203ENST00000430038 MFSD2BA6NFX1 497 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
CPSF4-203ENST00000430038 FOLR2P14207 255 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 ARPC4P59998 168 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 CLEC19AQ6UXS0 136 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-203ENST00000430038 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 PEMTQ9UBM1 199 aa12.87□□□□□ -0.35
CPSF4-203ENST00000430038 IGLV11-55A0A075B6I3 123 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 CREBL2O60519 120 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-203ENST00000430038 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
CPSF4-203ENST00000430038 HLA-GP17693 338 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 MAS1LP35410 378 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 RPS19P39019 145 aaKnown RBP12.86□□□□□ -0.35
CPSF4-203ENST00000430038 SCAND1P57086 179 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 FXYD4P59646 89 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 OR2B8PP59922 312 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
CPSF4-203ENST00000430038 SLC25A42Q86VD7 318 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
CPSF4-203ENST00000430038 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 Q9H521 79 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 ZC4H2Q9NQZ6 224 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 BET1LQ9NYM9 111 aa12.86□□□□□ -0.35
CPSF4-203ENST00000430038 PLECQ15149 4684 aaKnown RBP12.85□□□□□ -0.35
CPSF4-203ENST00000430038 IGLC7A0M8Q6 106 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms