RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 A0A087WXM4 84 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 HMX3A6NHT5 357 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 NPIPB5A8MRT5 1133 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 OR2J3O76001 311 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 BRWD1-AS2P59051 145 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
GPC1-203ENST00000425056 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
GPC1-203ENST00000425056 OR2A7Q96R45 310 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 SPATA2Q9UM82 520 aa13.42□□□□□ -0.26
GPC1-203ENST00000425056 A0A1B0GW64 132 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 IL6RP08887 468 aaPredicted RBP13.41□□□□□ -0.26
GPC1-203ENST00000425056 ZNF735P0CB33 412 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 MAS1LP35410 378 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 RPL27AP46776 148 aaKnown RBP13.41□□□□□ -0.26
GPC1-203ENST00000425056 CD81P60033 236 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 LINC00322Q6ZN03 302 aaPredicted RBP13.41□□□□□ -0.26
GPC1-203ENST00000425056 ZNF66Q6ZN08 573 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 SLC2A9Q9NRM0 540 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 SSR3Q9UNL2 185 aa13.41□□□□□ -0.26
GPC1-203ENST00000425056 PPP5D1E7EU14 171 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 E7EUB6 86 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 IFNA6P05013 189 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 SCAND1P57086 179 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 MSMO1Q15800 293 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 KLK9Q2XQG4 91 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 MFSD4AQ8N468 514 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 SLC25A38Q96DW6 304 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 PLEKHA3Q9HB20 300 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 VCX3AQ9NNX9 186 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 ZC4H2Q9NQZ6 224 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 GAR1Q9NY12 217 aaKnown RBP13.4□□□□□ -0.26
GPC1-203ENST00000425056 KLK9Q9UKQ9 250 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 CEPT1Q9Y6K0 416 aa13.4□□□□□ -0.26
GPC1-203ENST00000425056 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 ZNF785A8K8V0 405 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 LGALS9O00182 355 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 GGCTO75223 188 aaKnown RBP13.39□□□□□ -0.27
GPC1-203ENST00000425056 CRYGCP07315 174 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 SDC2P34741 201 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 KIR2DS2P43631 304 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 BEST4Q8NFU0 473 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 FYTTD1Q96QD9 318 aaKnown RBP13.39□□□□□ -0.27
GPC1-203ENST00000425056 NEURL2Q9BR09 285 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 FBXL7Q9UJT9 491 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 ETV7Q9Y603 341 aa13.39□□□□□ -0.27
GPC1-203ENST00000425056 DPPA5A6NC42 116 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 TPPPO94811 219 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 HRASP01112 189 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 HLA-AP01891 365 aaKnown RBP13.38□□□□□ -0.27
GPC1-203ENST00000425056 FOLR2P14207 255 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 AREGP15514 252 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 ARPC4P59998 168 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 OR13F1Q8NGS4 319 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 GPHA2Q96T91 129 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
GPC1-203ENST00000425056 TECRQ9NZ01 308 aaKnown RBP13.38□□□□□ -0.27
GPC1-203ENST00000425056 OR2C1O95371 312 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 DHFRP00374 187 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 CD7P09564 240 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 CTRB1P17538 263 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 EDN2P20800 178 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 PSMB6P28072 239 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
GPC1-203ENST00000425056 TIMM50Q3ZCQ8 353 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 CTRB2Q6GPI1 263 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 GVQW1Q8N7I0 195 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 SECTM1Q8WVN6 248 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 RETNQ9HD89 108 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 BET1LQ9NYM9 111 aa13.37□□□□□ -0.27
GPC1-203ENST00000425056 A0A0A6YYH2 397 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 A6NJ64 397 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 A8MWP6 167 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.27
GPC1-203ENST00000425056 TNFSF12O43508 249 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 NDUFB8O95169 186 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 PPYP01298 95 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 CLEC2LP0C7M8 214 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 FCGR2CP31995 323 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 ARL3P36405 182 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 MXD1Q05195 221 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 HOGA1Q86XE5 327 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 ZBTB34Q8NCN2 500 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 MRPS26Q9BYN8 205 aaKnown RBP13.36□□□□□ -0.27
GPC1-203ENST00000425056 WFDC10AQ9H1F0 79 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
GPC1-203ENST00000425056 DNAH1Q9P2D7 4330 aa13.35□□□□□ -0.27
GPC1-203ENST00000425056 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms