RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 C12orf77C9JDV5 145 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 WNT9BO14905 357 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 NXPH2O95156 264 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 CELA3BP08861 270 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 NPSP0C0P6 89 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 CLDN18P56856 261 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 PLP2Q04941 152 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 AESQ08117 197 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 TBR1Q16650 682 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 NRN1LQ496H8 165 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.94□□□□□ -0.5
MSH5-206ENST00000423982 SPRR3Q9UBC9 169 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 HCFC1P51610 2035 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 TRGV5A0A0B4J1U4 118 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 LINC00473A8K010 186 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 SLC17A3O00476 420 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 MBP02144 154 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 IRF2P14316 349 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 APH1AQ96BI3 265 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 MSL2Q9HCI7 577 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 MBNL3Q9NUK0 354 aaKnown RBP11.94□□□□□ -0.5
MSH5-206ENST00000423982 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
MSH5-206ENST00000423982 SCO2A0A1W2PP80 73 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 LCN2P80188 198 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 TGFBR3Q03167 851 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 BATFQ16520 125 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 RBMXL3Q8N7X1 1067 aaKnown RBP11.93□□□□□ -0.5
MSH5-206ENST00000423982 RFESDQ8TAC1 157 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 PIGBOS1A0A0B4J2F0 54 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 RRHO14718 337 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 OR10J1P30954 320 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 MSMO1Q15800 293 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 Q6ZR03 302 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
MSH5-206ENST00000423982 QTRT1Q9BXR0 403 aaKnown RBP11.93□□□□□ -0.5
MSH5-206ENST00000423982 PKIBQ9C010 78 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 ZDHHC11Q9H8X9 412 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
MSH5-206ENST00000423982 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 C15orf62A8K5M9 175 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 TMPRSS3P57727 454 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 LTC4SQ16873 150 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 MRGPRDQ8TDS7 321 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 TMEM208Q9BTX3 173 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 OR2J1Q9GZK6 312 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 SSTR5P35346 364 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 MOB1BQ7L9L4 216 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 H2BFWTQ7Z2G1 175 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 MDP1Q86V88 176 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 ZFYVE26Q68DK2 2539 aa11.92□□□□□ -0.5
MSH5-206ENST00000423982 TET2Q6N021 2002 aaPredicted RBP11.91□□□□□ -0.5
MSH5-206ENST00000423982 F6UZH7 168 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 SERF1AO75920 110 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 HBZP02008 142 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 EIF4EBP1Q13541 118 aaPredicted RBP11.91□□□□□ -0.5
MSH5-206ENST00000423982 VKORC1L1Q8N0U8 176 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 TMEM106BQ9NUM4 274 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 WIPI2Q9Y4P8 454 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 RNF212BA8MTL3 300 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 YPEL1O60688 119 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 IGHV3-13P01766 116 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 IGHV3-7P01780 117 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 RAC2P15153 192 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 ARR3P36575 388 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 GALMQ96C23 342 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 HSPB9Q9BQS6 159 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
MSH5-206ENST00000423982 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 AQP7O14520 342 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 CD1BP29016 333 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 FOXL1Q12952 345 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 VWC2Q2TAL6 325 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 TPTE2P1Q5T6R2 138 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 MIC13Q5XKP0 118 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 DIRC2Q96SL1 478 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 COL12A1Q99715 3063 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 PDE6DO43924 150 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 SPINK4O60575 86 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 HAND1O96004 215 aa11.9□□□□□ -0.5
MSH5-206ENST00000423982 KITLGP21583 273 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms