RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 FAM110AQ9BQ89 295 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 ZNF257Q9Y2Q1 563 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 OR2W1Q9Y3N9 320 aa12.23□□□□□ -0.45
COL18A1-205ENST00000423214 TRAV18A0A075B6X5 111 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 PPP5D1E7EU14 171 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 SSX5O60225 188 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 NFYAP23511 347 aaPredicted RBP12.22□□□□□ -0.45
COL18A1-205ENST00000423214 GUCA2BQ16661 112 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 TTC9CQ8N5M4 171 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 OR4S2Q8NH73 311 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 IL17DQ8TAD2 202 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 SLC25A38Q96DW6 304 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 SRD5A3Q9H8P0 318 aa12.22□□□□□ -0.45
COL18A1-205ENST00000423214 RBMX2Q9Y388 322 aaKnown RBP12.22□□□□□ -0.45
COL18A1-205ENST00000423214 A0A087WXM4 84 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.45
COL18A1-205ENST00000423214 SCGNO76038 276 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 KBTBD11O94819 623 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 CD7P09564 240 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.45
COL18A1-205ENST00000423214 MECP2P51608 486 aaKnown RBP12.21□□□□□ -0.45
COL18A1-205ENST00000423214 VKORC1L1Q8N0U8 176 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 YIPF6Q96EC8 236 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 HSD17B10Q99714 261 aaKnown RBP12.21□□□□□ -0.45
COL18A1-205ENST00000423214 DCSTAMPQ9H295 470 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 ETV7Q9Y603 341 aa12.21□□□□□ -0.45
COL18A1-205ENST00000423214 EPPK1P58107 5090 aaKnown RBP12.2□□□□□ -0.46
COL18A1-205ENST00000423214 HMX3A6NHT5 357 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 DHFRP00374 187 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 HLA-AP01891 365 aaKnown RBP12.2□□□□□ -0.46
COL18A1-205ENST00000423214 FCER2P06734 321 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 PTHLHP12272 177 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 DEFB125Q8N687 156 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 FYTTD1Q96QD9 318 aaKnown RBP12.2□□□□□ -0.46
COL18A1-205ENST00000423214 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 WFDC10AQ9H1F0 79 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 TECRQ9NZ01 308 aaKnown RBP12.2□□□□□ -0.46
COL18A1-205ENST00000423214 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
COL18A1-205ENST00000423214 NPIPB5A8MRT5 1133 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 TEX22C9J3V5 150 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 HLA-DQB1P01920 261 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 FOLR2P14207 255 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 ARL3P36405 182 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 RPS19P39019 145 aaKnown RBP12.19□□□□□ -0.46
COL18A1-205ENST00000423214 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
COL18A1-205ENST00000423214 DEFB114Q30KQ6 69 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 TIMM50Q3ZCQ8 353 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 CNIH2Q6PI25 160 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 GVQW1Q8N7I0 195 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 ZC4H2Q9NQZ6 224 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 ANXA10Q9UJ72 324 aa12.19□□□□□ -0.46
COL18A1-205ENST00000423214 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 LGALS9O00182 355 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 IGHV3-23P01764 117 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 MAS1LP35410 378 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 SCAND1P57086 179 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
COL18A1-205ENST00000423214 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 EEF1AKMT3Q96AZ1 226 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
COL18A1-205ENST00000423214 DIABLOQ9NR28 239 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 TAS2R8Q9NYW2 309 aa12.18□□□□□ -0.46
COL18A1-205ENST00000423214 MEIS3P1A6NDR6 274 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 ZNF785A8K8V0 405 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 OR2C1O95371 312 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 HRASP01112 189 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 EDN2P20800 178 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 KIR2DS2P43631 304 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 ARPC4P59998 168 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 SSX9Q7RTT3 188 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
COL18A1-205ENST00000423214 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 AUNIPQ9H7T9 357 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 SLC2A9Q9NRM0 540 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 S4R3C0 116 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
COL18A1-205ENST00000423214 HYDINQ4G0P3 5121 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 IGLV2-14P01704 120 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 IL6RP08887 468 aaPredicted RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 ZNF735P0CB33 412 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 DEFA4P12838 97 aa12.16□□□□□ -0.46
COL18A1-205ENST00000423214 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
COL18A1-205ENST00000423214 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms