RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 PHB2Q99623 299 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 TINAGL1Q9GZM7 467 aaPredicted RBP4.97□□□□□ -1.61
USP54-202ENST00000413442 CCL28Q9NRJ3 127 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SLC2A9Q9NRM0 540 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 TPSG1Q9NRR2 321 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 EHFQ9NZC4 300 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 NDUFA13Q9P0J0 144 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 MTFP1Q9UDX5 166 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 SCOCQ9UIL1 159 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 MGAM2Q2M2H8 2515 aa4.97□□□□□ -1.61
USP54-202ENST00000413442 TRBV9A0A0B4J1U6 114 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 IGKV1D-13A0A0B4J2D9 117 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 DPPA5A6NC42 116 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 OVOL1O14753 267 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 MPPED1O15442 326 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 RGS5O15539 181 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 SNAPC5O75971 98 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TRGV3P03979 118 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 EIF4EP06730 217 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 FCER2P06734 321 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 ZNF735P0CB33 412 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 SAA1P0DJI8 122 aaPredicted RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 SMIM18P0DKX4 95 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 IGKV1-13P0DP09 117 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 IGLL1P15814 213 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 RPL27AP46776 148 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 RFX2P48378 723 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TPPP2P59282 170 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TAS2R19P59542 299 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 ERVK-16P61578 105 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 RND3P61587 244 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 MEF2DQ14814 521 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TNXAQ16473 311 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 ECSCRQ19T08 205 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 RNASE10Q5GAN6 216 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 TMEM229BQ8NBD8 167 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 OR6Q1Q8NGQ2 317 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 OR5B3Q8NH48 314 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TERB2Q8NHR7 220 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 DGCR14Q96DF8 476 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 CXorf58Q96LI9 332 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TMEM56Q96MV1 263 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 OR4C12Q96R67 309 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 CLCC1Q96S66 551 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 ZNF2Q9BSG1 426 aaPredicted RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 RSRP1Q9BUV0 290 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 COMMD5Q9GZQ3 224 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 KLK15Q9H2R5 256 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 ZNF355PQ9NSJ1 428 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 GAR1Q9NY12 217 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 CCDC59Q9P031 241 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 PEF1Q9UBV8 284 aaKnown RBP4.96□□□□□ -1.62
USP54-202ENST00000413442 VWFP04275 2813 aa4.96□□□□□ -1.62
USP54-202ENST00000413442 TRBV7-1A0A0A6YYK4 115 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 H0Y980 276 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 UPK2O00526 184 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 SOX15O60248 233 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 HPGDSO60760 199 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 CD74P04233 296 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 HLA-GP17693 338 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 HRH1P35367 487 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 LINC00205P59089 165 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 RPL30P62888 115 aaKnown RBP4.95□□□□□ -1.62
USP54-202ENST00000413442 ATP5G2Q06055 141 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 AADACL3Q5VUY0 350 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 OR4A47Q6IF82 309 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 ACSM6Q6P461 480 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 ZNF818PQ6ZRF7 136 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 CLVS1Q8IUQ0 354 aaPredicted RBP4.95□□□□□ -1.62
USP54-202ENST00000413442 CCDC71LQ8N9Z2 235 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 ADAD2Q8NCV1 583 aaKnown RBP4.95□□□□□ -1.62
USP54-202ENST00000413442 DMBX1Q8NFW5 382 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 OR5T1Q8NG75 326 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 OR1L8Q8NGR8 309 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 OR2K2Q8NGT1 345 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 GRPEL2Q8TAA5 225 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 DYNC2LI1Q8TCX1 351 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 CYYR1Q96J86 154 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 FYTTD1Q96QD9 318 aaKnown RBP4.95□□□□□ -1.62
USP54-202ENST00000413442 ZNF430Q9H8G1 570 aaPredicted RBP4.95□□□□□ -1.62
USP54-202ENST00000413442 PEMTQ9UBM1 199 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 EXTL2Q9UBQ6 330 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 PRNDQ9UKY0 176 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 FBXO7Q9Y3I1 522 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
USP54-202ENST00000413442 MARCH11A6NNE9 402 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 SEC14L6B5MCN3 397 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 DISC1C4P0D8 188 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 J3QRK9 145 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 LGALS9O00182 355 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 GSTZ1O43708 216 aaPredicted RBP4.94□□□□□ -1.62
USP54-202ENST00000413442 PMP2P02689 132 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 SERPINE2P07093 398 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 TRAPPC2P0DI81 140 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 TRAPPC2BP0DI82 140 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 CTRB1P17538 263 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 HLA-DMAP28067 261 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 PSMB6P28072 239 aa4.94□□□□□ -1.62
USP54-202ENST00000413442 S100A5P33763 92 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms