RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PRELID3BQ9Y3B1 194 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 FAM157AC9JC47 383 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 NDUFA2O43678 99 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 PROP1O75360 226 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 SCAF4O95104 1147 aaKnown RBP13.95□□□□□ -0.18
PTPRC-206ENST00000413409 FSTL3O95633 263 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 KRASP01116 189 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 IAPPP10997 89 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 OMGP23515 440 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 ATP6V0CP27449 155 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 THBS3P49746 956 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 UBE2KP61086 200 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 MUC15Q8N387 334 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 DDB2Q92466 427 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 R3HDM4Q96D70 268 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 CIB3Q96Q77 187 aaPredicted RBP13.95□□□□□ -0.18
PTPRC-206ENST00000413409 PARD6GQ9BYG4 376 aaPredicted RBP13.95□□□□□ -0.18
PTPRC-206ENST00000413409 RBKSQ9H477 322 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 CACFD1Q9UGQ2 172 aa13.95□□□□□ -0.18
PTPRC-206ENST00000413409 MARCH11A6NNE9 402 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 SLC31A2O15432 143 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 NDUFB7P17568 137 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 PPOXP50336 477 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 ZNF134P52741 427 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 HBG1P69891 147 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 HBG2P69892 147 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 TMEM267Q0VDI3 215 aaPredicted RBP13.94□□□□□ -0.18
PTPRC-206ENST00000413409 TUSC1Q2TAM9 212 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 CT45A1Q5HYN5 189 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 TMEM14EPQ6UXP3 125 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
PTPRC-206ENST00000413409 OR4S2Q8NH73 311 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 CT45A3Q8NHU0 189 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 SH3BGRL3Q9H299 93 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 HRH4Q9H3N8 390 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 NARFLQ9H6Q4 476 aa13.94□□□□□ -0.18
PTPRC-206ENST00000413409 SAA2-SAA4A0A096LPE2 208 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 IGHV1-69-2A0A0G2JMI3 117 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 H3BP45 60 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 FCGR3BO75015 233 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 IFNA5P01569 189 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 OR8U8P0C7N1 319 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 SAA2P0DJI9 122 aaPredicted RBP13.93□□□□□ -0.18
PTPRC-206ENST00000413409 DAOP14920 347 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 CAMLGP49069 296 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 ERVK-16P61578 105 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 RPL39P5Q59GN2 51 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 LRRC10Q5BKY1 277 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 SLC25A48Q6ZT89 311 aaKnown RBP13.93□□□□□ -0.18
PTPRC-206ENST00000413409 S1PR3Q99500 378 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 ZNF251Q9BRH9 671 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 C19orf12Q9NSK7 152 aa13.93□□□□□ -0.18
PTPRC-206ENST00000413409 PPIHO43447 177 aaKnown RBP13.92□□□□□ -0.18
PTPRC-206ENST00000413409 NDUFB3O43676 98 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 M6PRP20645 277 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 PDLIM4P50479 330 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
PTPRC-206ENST00000413409 PRAMEF5Q5TYX0 476 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 DPPA3Q6W0C5 159 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 HEPN1Q6WQI6 88 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 TMEM182Q6ZP80 229 aaPredicted RBP13.92□□□□□ -0.18
PTPRC-206ENST00000413409 TMEM217Q8N7C4 229 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 LFNGQ8NES3 379 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 OR2G3Q8NGZ4 309 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 CCL17Q92583 94 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 RAB39BQ96DA2 213 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 ZNF714Q96N38 554 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 ARFGEF3Q5TH69 2177 aa13.92□□□□□ -0.18
PTPRC-206ENST00000413409 NQO2P16083 231 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 NFYBP25208 207 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 MRPS11P82912 194 aaKnown RBP13.91□□□□□ -0.18
PTPRC-206ENST00000413409 ZNF273Q14593 569 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 C10orf91Q5T1B1 145 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 HAPLN4Q86UW8 402 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 C8orf31Q8N9H6 132 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 OR52E5Q8NH55 327 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 DTD1Q8TEA8 209 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 NARS2Q96I59 477 aaKnown RBP13.91□□□□□ -0.18
PTPRC-206ENST00000413409 PIMREGQ9BSJ6 248 aa13.91□□□□□ -0.18
PTPRC-206ENST00000413409 NDUFS8O00217 210 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 TSPAN15O95858 294 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 PRH1P02810 166 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 METTL15P1P0C7V9 234 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 POU2AF1Q16633 256 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 HFEQ30201 348 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 AWAT1Q58HT5 328 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 DHRS7BQ6IAN0 325 aaPredicted RBP13.9□□□□□ -0.18
PTPRC-206ENST00000413409 FAM71F2Q6NXP2 309 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 PSMG3Q9BT73 122 aaPredicted RBP13.9□□□□□ -0.18
PTPRC-206ENST00000413409 HIPK2Q9H2X6 1198 aa13.9□□□□□ -0.18
PTPRC-206ENST00000413409 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
PTPRC-206ENST00000413409 TRBV23-1A0A0A0MS06 115 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 FCN3O75636 299 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 CD5P06127 495 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 DVL1P1P54792 670 aaPredicted RBP13.9□□□□□ -0.19
PTPRC-206ENST00000413409 SLC38A11Q08AI6 406 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 ZNF616Q08AN1 781 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 ARL16Q0P5N6 197 aa13.9□□□□□ -0.19
PTPRC-206ENST00000413409 ATP6V1FQ16864 119 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms