RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 S1PR2O95136 353 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 SLC6A1P30531 599 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 PPP5CP53041 499 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 RND3P61587 244 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 TNXAQ16473 311 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 POU2AF1Q16633 256 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 TMEM65Q6PI78 240 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 SSX9Q7RTT3 188 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 TBC1D26Q86UD7 250 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 TMEM167AQ8TBQ9 72 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 TMEM68Q96MH6 324 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 PRRT1Q99946 306 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 KLK15Q9H2R5 256 aa15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 FAM212BQ9NTI7 297 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-207ENST00000409417 A0A1W2PN81 502 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 MPPED1O15442 326 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 SOX15O60248 233 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 PF4V1P10720 104 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 PI3P19957 117 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 CHRNA7P36544 502 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 ECI1P42126 302 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 AP3S2P59780 193 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 ZNF585BQ52M93 769 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 OR4A47Q6IF82 309 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 OR5M8Q8NGP6 311 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 OR13C8Q8NGS7 320 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 OR4A5Q8NH83 315 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 MYOZ3Q8TDC0 251 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 MRGPRFQ96AM1 343 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 SLC2A8Q9NY64 477 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 BET1LQ9NYM9 111 aa15.5■□□□□ 0.07
PDLIM2-207ENST00000409417 MSGN1A6NI15 193 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 LPAR6P43657 344 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 CDX1P47902 265 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 RAB9AP51151 201 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 PIGPP57054 158 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 KLF9Q13886 244 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 SURF2Q15527 256 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 ZNF695Q8IW36 515 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 OR51S1Q8NGJ8 323 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 MARCH1Q8TCQ1 289 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 SRSF12Q8WXF0 261 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 SRRQ9GZT4 340 aa15.49■□□□□ 0.07
PDLIM2-207ENST00000409417 CTSDP07339 412 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 MAS1LP35410 378 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 RPL8P62917 257 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 TOMM5Q8N4H5 51 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 GDPD1Q8N9F7 314 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 KLHL30-AS1Q8NEE0 82 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 SPIN2AQ99865 258 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 SPIN2BQ9BPZ2 258 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 HRASLSQ9HDD0 168 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 MCUBQ9NWR8 336 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 SCP2D1Q9UJQ7 156 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 NOTCH1P46531 2555 aa15.48■□□□□ 0.07
PDLIM2-207ENST00000409417 MARCH11A6NNE9 402 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 NUDT19A8MXV4 375 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 IL6RP08887 468 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 CD40LGP29965 261 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 FAUP35544 74 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 ERVK-16P61578 105 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 KIAA0141Q14154 515 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 ASPHD1Q5U4P2 390 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 C18orf65Q6ZTR6 163 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 CADM3Q8N126 398 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 DMBX1Q8NFW5 382 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 DEDD2Q8WXF8 326 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 UBE2E2Q96LR5 201 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 PHB2Q99623 299 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 TMEM140Q9NV12 185 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 COPZ2Q9P299 210 aa15.47■□□□□ 0.07
PDLIM2-207ENST00000409417 KRASP01116 189 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 FGF2P09038 288 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 HLA-GP17693 338 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 C10orf55Q5SWW7 151 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 C8orf86Q6ZUL3 223 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 CCDC71LQ8N9Z2 235 aa15.46■□□□□ 0.07
PDLIM2-207ENST00000409417 H0Y980 276 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 UPK2O00526 184 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 SERPINE2P07093 398 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 ZNF491Q8N8L2 437 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 OR5T1Q8NG75 326 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 C4orf3Q8WVX3 66 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 RTBDNQ9BSG5 229 aaPredicted RBP15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 SLA2Q9H6Q3 261 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 GPR132Q9UNW8 380 aa15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 C14orf166Q9Y224 244 aaKnown RBP15.46■□□□□ 0.06
PDLIM2-207ENST00000409417 H3BUA1 57 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 PF4P02776 101 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 ZNF45Q02386 682 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 CNPY1Q3B7I2 92 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 CASTOR1Q8WTX7 329 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 SCGB3A2Q96PL1 93 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 C5orf66Q9H5L9 145 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 VSIG4Q9Y279 399 aa15.45■□□□□ 0.06
PDLIM2-207ENST00000409417 TRAV3A0A0B4J244 114 aa15.44■□□□□ 0.06
PDLIM2-207ENST00000409417 C3orf85A0A1B0GTC6 90 aa15.44■□□□□ 0.06
PDLIM2-207ENST00000409417 B3GALNT1O75752 331 aa15.44■□□□□ 0.06
PDLIM2-207ENST00000409417 BRI3O95415 125 aa15.44■□□□□ 0.06
PDLIM2-207ENST00000409417 APELAP0DMC3 54 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms