RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
CHMP3-203ENST00000409225 DEFB4AO15263 64 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 FCGR3BO75015 233 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 REG1AP05451 166 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 AREGP15514 252 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 PSMB6P28072 239 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 GPR183P32249 361 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 ST3GAL4Q11206 333 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 OR2B11Q5JQS5 317 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 MAFIPQ8WZ33 124 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 PHYHIPQ92561 330 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
CHMP3-203ENST00000409225 PKD1P98161 4303 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 TRBV7-1A0A0A6YYK4 115 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 A0A1B0GW64 132 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 EFCAB10A6NFE3 127 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 DHFRP00374 187 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 CRYGCP07315 174 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 MYOD1P15172 320 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 MFAP2P55001 183 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 ELLP55199 621 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-203ENST00000409225 MRPS15P82914 257 aaKnown RBP12.24□□□□□ -0.45
CHMP3-203ENST00000409225 PLAC9Q5JTB6 97 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 LAMTOR1Q6IAA8 161 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 SETD9Q8NE22 299 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 GINS4Q9BRT9 223 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 C6orf62Q9GZU0 229 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-203ENST00000409225 CSTL1Q9H114 145 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 OR51E2Q9H255 320 aa12.24□□□□□ -0.45
CHMP3-203ENST00000409225 OR4C46A6NHA9 309 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 MPTX1A8MV57 137 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 J3QRK9 145 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 MYL12BO14950 172 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 FCGR3AP08637 254 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 ZNF735P0CB33 412 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 DEFA4P12838 97 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 RPA2P15927 270 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
CHMP3-203ENST00000409225 WNT4P56705 351 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 ZNF124Q15973 351 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 ZFP1Q6P2D0 407 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 PLGRKTQ9HBL7 147 aa12.23□□□□□ -0.45
CHMP3-203ENST00000409225 KBTBD11O94819 623 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 PSMD7P51665 324 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 HSD17B12Q53GQ0 312 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 OR56B1Q8NGI3 324 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 CXorf58Q96LI9 332 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 OR2A7Q96R45 310 aa12.22□□□□□ -0.45
CHMP3-203ENST00000409225 ZNF436Q9C0F3 470 aaPredicted RBP12.22□□□□□ -0.45
CHMP3-203ENST00000409225 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 RAB27BO00194 218 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 CD37P11049 281 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 H1FOOQ8IZA3 346 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-203ENST00000409225 TMEM167AQ8TBQ9 72 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 ZNF502Q8TBZ5 544 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 MRPS7Q9Y2R9 242 aaKnown RBP12.21□□□□□ -0.45
CHMP3-203ENST00000409225 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
CHMP3-203ENST00000409225 ATP5HO75947 161 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 DIRAS3O95661 229 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 CDK1P06493 297 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-203ENST00000409225 CRHBPP24387 322 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 MAS1LP35410 378 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
CHMP3-203ENST00000409225 PUSL1Q8N0Z8 303 aaKnown RBP12.2□□□□□ -0.46
CHMP3-203ENST00000409225 MS4A15Q8N5U1 240 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 GFI1Q99684 422 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
CHMP3-203ENST00000409225 SMPD3Q9NY59 655 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-203ENST00000409225 KCNK7Q9Y2U2 307 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 HSPG2P98160 4391 aa12.2□□□□□ -0.46
CHMP3-203ENST00000409225 C11orf94C9JXX5 98 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 SLC17A2O00624 439 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 RTL8CO15255 209 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 CLDN12P56749 244 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 RAB11BQ15907 218 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 SSX9Q7RTT3 188 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 ZNF645Q8N7E2 425 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 CYGBQ8WWM9 190 aa12.19□□□□□ -0.46
CHMP3-203ENST00000409225 IGHV3OR16-8A0A075B7F1 116 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 TGOLN2O43493 480 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 DENRO43583 198 aaKnown RBP12.18□□□□□ -0.46
CHMP3-203ENST00000409225 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
CHMP3-203ENST00000409225 PLA2G7Q13093 441 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 AHSA2Q719I0 299 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 NANOGP1Q8N7R0 232 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 OR4S2Q8NH73 311 aa12.18□□□□□ -0.46
CHMP3-203ENST00000409225 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms