RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TRAPPC2LH3BP13 241 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 H7C417 338 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 K7EQM0 130 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 RGS5O15539 181 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 HPGDSO60760 199 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CA11O75493 328 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PAHP00439 452 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 LHBP01229 141 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CD8AP01732 235 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 IGHV1-46P01743 117 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 GLAP06280 429 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PGA5P0DJD9 388 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 GTF2F2P13984 249 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 COX6B1P14854 86 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 MGMTP16455 207 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CD40LGP29965 261 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TALDO1P37837 337 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PMELP40967 661 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 LEPP41159 167 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PPT1P50897 306 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CAV2P51636 162 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CLDN12P56749 244 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 FGF12P61328 243 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 GNB2P62879 340 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 MRPS10P82664 201 aaKnown RBP3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 UNC119Q13432 240 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 RSU1Q15404 277 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 MPV17LQ2QL34 196 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TRIM16LQ309B1 348 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 DMRTC1Q5HYR2 192 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 SPANXN2Q5MJ10 180 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 HAGHLQ6PII5 290 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 WDR82Q6UXN9 313 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 IL34Q6ZMJ4 242 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 SLC25A26Q70HW3 274 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 LINC00596Q86U02 117 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 OSR2Q8N2R0 312 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR2Z1Q8NG97 314 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR10AD1Q8NGE0 317 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR10A7Q8NGE5 316 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR5H6Q8NGV6 325 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 DIRAS2Q96HU8 199 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CEP19Q96LK0 163 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TBX15Q96SF7 602 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 TSC22D3Q99576 134 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 NRIP2Q9BQI9 281 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 LPAR5Q9H1C0 372 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 PLEKHF2Q9H8W4 249 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 FN3KRPQ9HA64 309 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 SPACA1Q9HBV2 294 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 HES4Q9HCC6 221 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 HMG20AQ9NP66 347 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 DYNLRB1Q9NP97 96 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 DIABLOQ9NR28 239 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 RASL12Q9NYN1 266 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 NPTNQ9Y639 398 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 CRYBG3Q68DQ2 2970 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 ARHGAP32A7KAX9 2087 aa3.4□□□□□ -1.87
HMGB3P19-201ENST00000403971 IGKV1-12A0A0C4DH73 117 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 FABP12A6NFH5 140 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SERPINE3A8MV23 424 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SULT1C2O00338 296 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 CDIPTO14735 213 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 NDUFA2O43678 99 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SYNGR1O43759 233 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 ANGPTL7O43827 346 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 CRTAPO75718 401 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 IGKV1D-12P01611 117 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 EIF4EP06730 217 aaKnown RBP3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SOD3P08294 240 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 RBMY1CP0DJD4 496 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 MUC1P15941 1255 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 FUT3P21217 361 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 NPBWR2P48146 333 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 KCNJ3P48549 501 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 EFNB2P52799 333 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 RBM11P57052 281 aaKnown RBP3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 PITPNAQ00169 270 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 ZNF846Q147U1 533 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 MPPED2Q15777 294 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SMIM21Q3B7S5 101 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 SPIN3Q5JUX0 258 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 PRAMEF6Q5VXH4 476 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR10K2Q6IF99 312 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 CNIH2Q6PI25 160 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 ACP7Q6ZNF0 438 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 MOB3BQ86TA1 216 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 GDPD1Q8N9F7 314 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 TMEM104Q8NE00 496 aa3.39□□□□□ -1.87
HMGB3P19-201ENST00000403971 OR5D18Q8NGL1 313 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms