RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 JPT1Q9UK76 154 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 KLF4O43474 513 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 ZG16O60844 167 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
LIMCH1-203ENST00000396595 VENTXO95231 258 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 SSTR5P35346 364 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 CA7P43166 264 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 CCL8P80075 99 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 IGLV3-21P80748 117 aaPredicted RBP8.78□□□□□ -1
LIMCH1-203ENST00000396595 TMEM30BQ3MIR4 351 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 C19orf48Q6RUI8 117 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 TCF23Q7RTU1 214 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 CALYQ9NYX4 217 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 FOXL2P58012 376 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 ZNF415Q09FC8 603 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 TM4SF20Q53R12 229 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 TMEM177Q53S58 311 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 BIVMQ86UB2 503 aa8.78□□□□□ -1
LIMCH1-203ENST00000396595 TFF2Q03403 129 aa8.77□□□□□ -1
LIMCH1-203ENST00000396595 MEIG1Q5JSS6 88 aa8.77□□□□□ -1
LIMCH1-203ENST00000396595 ITLN1Q8WWA0 313 aa8.77□□□□□ -1
LIMCH1-203ENST00000396595 TCF19Q9Y242 345 aa8.77□□□□□ -1
LIMCH1-203ENST00000396595 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 SNAI2O43623 268 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 FGF5P12034 268 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZP1P60852 638 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 QSER1Q2KHR3 1735 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 TRAV8-6A0A0B4J262 113 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 PLAUP00749 431 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 CELA2AP08217 269 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 HTN1P15515 57 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 STPG3Q8N7X2 389 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZNF414Q96IQ9 312 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 MRPL32Q9BYC8 188 aaKnown RBP8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 AICDAQ9GZX7 198 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 IDI2-AS1Q9NZ38 188 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 A8MWV9 139 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 A8MXK9 166 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 CRYBB3P26998 211 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 PTGDSP41222 190 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZXDCQ2QGD7 858 aaPredicted RBP8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZNF818PQ6ZRF7 136 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZNF826PQ6ZT77 177 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 OR51G1Q8NGK1 321 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 SPTA1P02549 2419 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 IFNL4K9M1U5 179 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 CACNG7P62955 275 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 FAM71F2Q6NXP2 309 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 OR4D5Q8NGN0 318 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 PGLYRP4Q96LB8 373 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 PRELID3AQ96N28 172 aa8.77□□□□□ -1.01
LIMCH1-203ENST00000396595 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 AHRRA9YTQ3 701 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 S1PR2O95136 353 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 FXYD3Q14802 87 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 C10orf128Q5T292 105 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 HCP5Q6MZN7 132 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 PPP1R17O96001 155 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 GPR6P46095 362 aaPredicted RBP8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 TMPRSS3P57727 454 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 KCNS1Q96KK3 526 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 A0A0G2JK05 382 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 PGPEP1LA6NFU8 196 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 PATE3B3GLJ2 98 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 EFNB1P98172 346 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 C9orf153Q5TBE3 101 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 GPHA2Q96T91 129 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 NPFFR1Q9GZQ6 430 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 TMEM229AB2RXF0 380 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 NDUFA2O43678 99 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 LOXL3P58215 753 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 LCN2P80188 198 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 PMS2CLQ68D20 193 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 TCF24Q7RTU0 167 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 GATAD1Q8WUU5 269 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 RPRMQ9NS64 109 aa8.76□□□□□ -1.01
LIMCH1-203ENST00000396595 DOCK5Q9H7D0 1870 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 SVILO95425 2214 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 A0A1W2PS18 150 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 J3QW42 95 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 GCHFRP30047 84 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 KRTCAP3Q53RY4 240 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 GALNT14Q96FL9 552 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 METTL26Q96S19 204 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 NABP2Q9BQ15 211 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 AHCTF1Q8WYP5 2266 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 TFPI2P48307 235 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 EGR4Q05215 589 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 C2orf83Q53S99 150 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 PSMG4Q5JS54 123 aa8.75□□□□□ -1.01
LIMCH1-203ENST00000396595 DRAM1Q8N682 238 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms