RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 TMEM210A6NLX4 147 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 GCGP01275 180 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 Q6P435 159 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 SCRT1Q9BWW7 348 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
PCDH1-203ENST00000394536 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
PCDH1-203ENST00000394536 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 A0A1B0GUS0 222 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 APELAP0DMC3 54 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 IGHV1-2P23083 117 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 IL3RAP26951 378 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 SPCS3P61009 180 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 VWA1Q6PCB0 445 aa13.52□□□□□ -0.24
PCDH1-203ENST00000394536 SRP14P37108 136 aaKnown RBP13.52□□□□□ -0.25
PCDH1-203ENST00000394536 TAS2R45P59539 299 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 GABRA6Q16445 453 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 RTL8BQ17RB0 113 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 NHLRC2Q8NBF2 726 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 CORO2AQ92828 525 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 SFRP2Q96HF1 295 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 OR6C3Q9NZP0 311 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 NAGKQ9UJ70 344 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 LNP1A1A4G5 178 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 PPIHO43447 177 aaKnown RBP13.52□□□□□ -0.25
PCDH1-203ENST00000394536 GATA2P23769 480 aaPredicted RBP13.52□□□□□ -0.25
PCDH1-203ENST00000394536 JOSD1Q15040 202 aaPredicted RBP13.52□□□□□ -0.25
PCDH1-203ENST00000394536 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 MS4A5Q9H3V2 200 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 TCF19Q9Y242 345 aa13.52□□□□□ -0.25
PCDH1-203ENST00000394536 PLGLAQ15195 96 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 RPEL1Q2QD12 228 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 Q6ZS49 121 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 OR2V2Q96R30 315 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 COL6A6A6NMZ7 2263 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 J3QR06 171 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 CRYBB3P26998 211 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 OR5I1Q13606 314 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 MISP3Q96FF7 219 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 RRHO14718 337 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 HSBP1O75506 76 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 APOA2P02652 100 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 STUMQ69YW2 141 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 TMEM14EPQ6UXP3 125 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 ACP7Q6ZNF0 438 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 OR10X1Q8NGY0 326 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 DAZAP1Q96EP5 407 aaKnown RBP13.51□□□□□ -0.25
PCDH1-203ENST00000394536 NOL4LQ96MY1 436 aaPredicted RBP13.51□□□□□ -0.25
PCDH1-203ENST00000394536 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
PCDH1-203ENST00000394536 SLC31A2O15432 143 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 DOLPP1Q86YN1 238 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 TMEM256Q8N2U0 113 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 TIMM9Q9Y5J7 89 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 OR9G9P0C7N8 305 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 OR10J1P30954 320 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
PCDH1-203ENST00000394536 ERHP84090 104 aaKnown RBP13.5□□□□□ -0.25
PCDH1-203ENST00000394536 SLC35E4Q6ICL7 350 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 PQLC2Q6ZP29 291 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 BLNKQ8WV28 456 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 SGK494Q96LW2 274 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 SLC45A2Q9UMX9 530 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 LINC00473A8K010 186 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 VSTM5A8MXK1 200 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 UBE2G1P62253 170 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 WFDC8Q8IUA0 241 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 C22orf15Q8WYQ4 148 aa13.5□□□□□ -0.25
PCDH1-203ENST00000394536 MRPL18Q9H0U6 180 aaKnown RBP13.5□□□□□ -0.25
PCDH1-203ENST00000394536 MRPS18CQ9Y3D5 142 aaKnown RBP13.5□□□□□ -0.25
PCDH1-203ENST00000394536 NUP210LQ5VU65 1888 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 COX7A2P2O60397 106 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 PLAUP00749 431 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDH1-203ENST00000394536 OR5B3Q8NH48 314 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 CECR9P0C854 216 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 OPRK1P41145 380 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 UBE2L3P68036 154 aaKnown RBP13.49□□□□□ -0.25
PCDH1-203ENST00000394536 FOXF2Q12947 444 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 HLA-DRB5Q30154 266 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 CCL13Q99616 98 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 GZMBP10144 247 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 ZNF664Q8N3J9 261 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
PCDH1-203ENST00000394536 VPS13AQ96RL7 3174 aa13.49□□□□□ -0.25
PCDH1-203ENST00000394536 CHD3Q12873 2000 aaKnown RBP13.48□□□□□ -0.25
PCDH1-203ENST00000394536 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
PCDH1-203ENST00000394536 MGST3O14880 152 aa13.48□□□□□ -0.25
PCDH1-203ENST00000394536 CGAP01215 116 aa13.48□□□□□ -0.25
PCDH1-203ENST00000394536 GNB1P62873 340 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms