RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 CLEC7AQ9BXN2 247 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 MRPL32Q9BYC8 188 aaKnown RBP4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 GLI3P10071 1580 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 IGHV3OR16-8A0A075B7F1 116 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 IGHV1-69-2A0A0G2JMI3 117 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 H7C1H1 209 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 SPINT1O43278 529 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 CLEC19AQ6UXS0 136 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 SDHCQ99643 169 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 VGLL1Q99990 258 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 SSBP4Q9BWG4 385 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
GAPVD1-206ENST00000394104 ABCA3Q99758 1704 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 ODAMA1E959 279 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 DXOO77932 396 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 TMEM50AO95807 157 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 HSPE1P61604 102 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 SRSF4Q08170 494 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 RPL39P5Q59GN2 51 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 OR10J3Q5JRS4 329 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 VAX1Q5SQQ9 334 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 CLDND2Q8NHS1 167 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 LINC01560Q8TB33 94 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 ANAPC13Q9BS18 74 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 PSMG3Q9BT73 122 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 NHSQ6T4R5 1651 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 TRAV2A0A0B4J234 112 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 A0A1W2PPV9 198 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 CTSSP25774 331 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 PCOLCEQ15113 449 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 FAM214BQ7L5A3 538 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 TCF23Q7RTU1 214 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 NIT1Q86X76 327 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 TTC9CQ8N5M4 171 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 CLDN16Q9Y5I7 305 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 CGAP01215 116 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 FHITP49789 147 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 ZP4Q12836 540 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 ZNF660Q6AZW8 331 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 STHQ8IWL8 128 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 HMGCLL1Q8TB92 370 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 WFDC12Q8WWY7 111 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 RBM38Q9H0Z9 239 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 PRR33A8MZF0 331 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 GCM2O75603 506 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 IL6RP08887 468 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 HOXD4P09016 255 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 FHL5Q5TD97 284 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 FAM19A2Q8N3H0 131 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 NEUROG1Q92886 237 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 SCARF2Q96GP6 870 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 WDR54Q9H977 334 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 DOCK5Q9H7D0 1870 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 ZNF831Q5JPB2 1677 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 CXorf51AA0A1B0GTR3 108 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 C19orf67A6NJJ6 358 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 IGKV1D-33P01593 117 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 IGKV1-33P01594 117 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 C1QCP02747 245 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 PRB4P10163 310 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 C1orf174Q8IYL3 243 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 KIR3DL3Q8N743 410 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 MRPL20Q9BYC9 149 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 RNF115Q9Y4L5 304 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 SLC25A15Q9Y619 301 aa4.85□□□□□ -1.63
GAPVD1-206ENST00000394104 SDK1Q7Z5N4 2213 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 NPIPB4C9JG80 1138 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 KLF4O43474 513 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 LIPFP07098 398 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 PRB3Q04118 309 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 TFF3Q07654 80 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 ZNF415Q09FC8 603 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 FAM27BQ5VT28 67 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 AQP3Q92482 292 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 SRXN1Q9BYN0 137 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 SELENOKQ9Y6D0 94 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 EVI2AP22794 236 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 IRF3Q14653 427 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 TMEM155Q4W5P6 130 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 KLF14Q8TD94 323 aaPredicted RBP4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 SLC25A2Q9BXI2 301 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 DMRT1Q9Y5R6 373 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 RGPD4Q7Z3J3 1758 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 ATP5LO75964 103 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 GPR183P32249 361 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 TBR1Q16650 682 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 PRSS53Q2L4Q9 553 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 ATP1A1-AS1Q5TC04 95 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 PGPEP1LA6NFU8 196 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 AHRRA9YTQ3 701 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 H3BUT2 72 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 CRPP02741 224 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 IL36BQ9NZH7 164 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 TCF19Q9Y242 345 aa4.84□□□□□ -1.63
GAPVD1-206ENST00000394104 TRPM3Q9HCF6 1732 aaPredicted RBP4.84□□□□□ -1.64
GAPVD1-206ENST00000394104 IFNL4K9M1U5 179 aa4.84□□□□□ -1.64
GAPVD1-206ENST00000394104 PTP4A3O75365 173 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms