RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GNB2P62879 340 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 ATP6V1FQ16864 119 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 LY6G5BQ8NDX9 201 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 OSR1Q8TAX0 266 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 CLCC1Q96S66 551 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 FAM96BQ9Y3D0 163 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 TACC2O95359 2948 aa16.13■□□□□ 0.17
PDLIM5-205ENST00000380180 TMEM218A2RU14 115 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 C22orf46C9J442 243 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 ARG1P05089 322 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 HSPE1P61604 102 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 LHX4Q969G2 390 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 PINX1Q96BK5 328 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 AIFM2Q9BRQ8 373 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 PARD6GQ9BYG4 376 aaPredicted RBP16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 UBE2L5PA0A1B0GUS4 154 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 UPK2O00526 184 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 IFNA10P01566 189 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 RBP4P02753 201 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 OR8U8P0C7N1 319 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 MYOD1P15172 320 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 AKR1C8PQ5T2L2 129 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 TGIF2LXQ8IUE1 241 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 TNFRSF14Q92956 283 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 FLYWCH2Q96CP2 140 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 TREM1Q9NP99 234 aa16.12■□□□□ 0.17
PDLIM5-205ENST00000380180 IGLV1-47P01700 117 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 APOC3P02656 99 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 PRB1P04280 392 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 LIPFP07098 398 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 SAA1P0DJI8 122 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 IL3RAP26951 378 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 SNCAP37840 140 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 PRRX1P54821 245 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 TMEM177Q53S58 311 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 TAF15Q92804 592 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 HARBI1Q96MB7 349 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 RNASEK-C17orf49H0YIS7 233 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 HOXA1P49639 335 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 RPP30P78346 268 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 OR4C13Q8NGP0 309 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 PSMG3Q9BT73 122 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 TMEM147Q9BVK8 224 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 CLEC7AQ9BXN2 247 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 BET1LQ9NYM9 111 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 ONECUT1Q9UBC0 465 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 PRNDQ9UKY0 176 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 OR51B2Q9Y5P1 312 aa16.11■□□□□ 0.17
PDLIM5-205ENST00000380180 FLNCQ14315 2725 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 hCG_1809904A0A1W2PP81 198 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 A0A1W2PPE2 198 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 A0A1W2PR64 198 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 A0A1W2PRV1 198 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 RRHO14718 337 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 GPR6P46095 362 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 HLA-DRB5Q30154 266 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 PDPNQ86YL7 162 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 PUSL1Q8N0Z8 303 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 BBC3Q96PG8 261 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 SSBP3Q9BWW4 388 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 UQCC1Q9NVA1 299 aa16.1■□□□□ 0.17
PDLIM5-205ENST00000380180 A0A1B0GV50 99 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 CD5P06127 495 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 EFNA4P52798 201 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 COMMD1Q8N668 190 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 PCGF1Q9BSM1 259 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 WASHC3Q9Y3C0 194 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 ZFYVE26Q68DK2 2539 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 KBTBD11O94819 623 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 MS4A7Q9GZW8 240 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 ZNF257Q9Y2Q1 563 aa16.09■□□□□ 0.17
PDLIM5-205ENST00000380180 PLXNB1O43157 2135 aa16.08■□□□□ 0.17
PDLIM5-205ENST00000380180 LOC105371242A0A075B767 164 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 BUB1B-PAK6H3BSN5 160 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 H2AFB1P0C5Y9 115 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 ADCYAP1P18509 176 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 COX7A1P24310 79 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 MC5RP33032 325 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 DVL1P1P54792 670 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 SERF2P84101 59 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 HNF4GQ14541 408 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 VWC2Q2TAL6 325 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 DPPA3Q6W0C5 159 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 Q8N7P7 452 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 BEND2Q8NDZ0 799 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 TMEM170AQ8WVE7 144 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 HINT2Q9BX68 163 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 VSIRQ9H7M9 311 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 WNK2Q9Y3S1 2297 aa16.08■□□□□ 0.16
PDLIM5-205ENST00000380180 TEX50A0A1B0GTY4 177 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 OPN1MWP04001 364 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 OPN1MW2P0DN77 364 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 OPN1MW3P0DN78 364 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 ARF6P62330 175 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 SPSB3Q6PJ21 355 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 ETV3LQ6ZN32 361 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 SCRT1Q9BWW7 348 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 ENY2Q9NPA8 101 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 RPRMQ9NS64 109 aa16.07■□□□□ 0.16
PDLIM5-205ENST00000380180 DOPEY1Q5JWR5 2465 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms