RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NFYBP25208 207 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 RELBQ01201 579 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 RHEBQ15382 184 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 LRRC10Q5BKY1 277 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 DUX4L9Q6RFH8 374 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 LYG1Q8N1E2 194 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 CLDND2Q8NHS1 167 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 PLPPR2Q96GM1 343 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF251Q9BRH9 671 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 SMCO4Q9NRQ5 59 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 RPRMQ9NS64 109 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 KAAG1Q9UBP8 84 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 ADGRG4Q8IZF6 3080 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 C15orf61A6NNL5 157 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 TNFRSF13BO14836 293 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 NDUFB3O43676 98 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 MPDU1O75352 247 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 NDUFS6O75380 124 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 FSTL3O95633 263 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 RPL31P62899 125 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 CCL20P78556 96 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 RTL8BQ17RB0 113 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 FAM71F2Q6NXP2 309 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 HEPN1Q6WQI6 88 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 C8orf31Q8N9H6 132 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF714Q96N38 554 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 TUBA4BQ9H853 241 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 FOXA2Q9Y261 457 aaPredicted RBP8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 CELSR1Q9NYQ6 3014 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 LOC102723971A0A1B0GUV8 181 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 A0A1B0GV50 99 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 C15orf62A8K5M9 175 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 H7C2Y5 167 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 MDKP21741 143 aaPredicted RBP8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 FGF7P21781 194 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 VDAC2P45880 294 aaPredicted RBP8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 LINC00205P59089 165 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 OR2B8PP59922 312 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 RAB11AP62491 216 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 ICAM4Q14773 271 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 AWAT1Q58HT5 328 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 LINC00311Q8N616 119 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF709Q8N972 641 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 P2RX4Q99571 388 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 CISD1Q9NZ45 108 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-201ENST00000379340 HCFC1P51610 2035 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 CTXND1A0A1B0GTU2 59 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 CCL21O00585 134 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 GNG10P50151 68 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 ATP5IP56385 69 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 DLK1P80370 383 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 FLI1Q01543 452 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 HAGHQ16775 308 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 HFEQ30201 348 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 TMEM88Q6PEY1 159 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF833PQ6ZTB9 187 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 SSX9Q7RTT3 188 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 TGIF2LYQ8IUE0 185 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF383Q8NA42 475 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 CCL17Q92583 94 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 LEAP2Q969E1 77 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 RHOVQ96L33 236 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 RARRES2Q99969 163 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 HEYLQ9NQ87 328 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 PRNDQ9UKY0 176 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 TCF19Q9Y242 345 aa8.59□□□□□ -1.03
POLR2J3-201ENST00000379340 TRBV23-1A0A0A0MS06 115 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 A0A1W2PPE3 182 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 M0R036 132 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 IFNA10P01566 189 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 IGHV3-7P01780 117 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 APOA2P02652 100 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 OR13C7P0DN81 318 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 BCL2P10415 239 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 HOXA1P49639 335 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 HSPE1P61604 102 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 ZNF726P1Q15940 193 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 RBMS3Q6XE24 437 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 C1orf229Q6ZS94 237 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 NPCDR1Q9BY65 106 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 ACTR3CQ9C0K3 210 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms