RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 KCNAB3O43448 404 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 ACTL6BO94805 426 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 CD28P10747 220 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 NQO2P16083 231 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 SURF2Q15527 256 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 KHDC1LQ5JSQ8 128 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 LFNGQ8NES3 379 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 SPATA3Q8NHX4 192 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 PLEKHA2Q9HB19 425 aa9.23□□□□□ -0.93
DEPDC4-202ENST00000378244 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 PSMB11A5LHX3 300 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 OR2A4O95047 310 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 CRYGBP07316 175 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 OR5AC1P0C628 307 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 MYOD1P15172 320 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 ECI1P42126 302 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 PRSS8Q16651 343 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 MRGPRG-AS1Q2M3A8 158 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 TRIM16LQ309B1 348 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 TM4SF20Q53R12 229 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 TEX45Q8NA69 505 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 CCDC32Q9BV29 185 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 ZNF747Q9BV97 191 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 WDR12Q9GZL7 423 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 NSG2Q9Y328 171 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 WNK1Q9H4A3 2382 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 ARPC1BO15143 372 aaKnown RBP9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 CD40LGP29965 261 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 CHPT1Q8WUD6 406 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 ARPC1AQ92747 370 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 TMEM140Q9NV12 185 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 FLVCR2Q9UPI3 526 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
DEPDC4-202ENST00000378244 A0A1W2PRX2 142 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 LYRM1O43325 122 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 KBTBD11O94819 623 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 IGKV1-39P01597 117 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 IGKV1D-39P04432 117 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 VDAC1P21796 283 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 TAS2R31P59538 309 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 ERVK-16P61578 105 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 RND3P61587 244 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 TMEM230Q96A57 120 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 SCGB3A2Q96PL1 93 aa9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 CITED2Q99967 270 aaPredicted RBP9.21□□□□□ -0.93
DEPDC4-202ENST00000378244 TRAV41A0A0B4J266 112 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 MSGN1A6NI15 193 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 H0Y980 276 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 IGF1P05019 195 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 EGR2P11161 476 aaPredicted RBP9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 BTCP35070 178 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 IFITM3Q01628 133 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 RBMS2Q15434 407 aaKnown RBP9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 TCTEX1D4Q5JR98 221 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 UNQ5815/PRO19632Q6UWF5 114 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 SGPP2Q8IWX5 399 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 DEDD2Q8WXF8 326 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 PHB2Q99623 299 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 NAA60Q9H7X0 242 aa9.21□□□□□ -0.94
DEPDC4-202ENST00000378244 A0A1W2PN81 502 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 NAP1L6A6NFF2 107 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 CRYM-AS1A6NIL9 109 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 E7EUB6 86 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 FBXO24O75426 580 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 CHRNA7P36544 502 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 AKR1C2P52895 323 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 NSUN5P1Q3KNT7 163 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 PUSL1Q8N0Z8 303 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 OR4X2Q8NGF9 303 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 SRSF12Q8WXF0 261 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 FYTTD1Q96QD9 318 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 CITED1Q99966 193 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 FAM25EA8MYX2 175 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 UPK1BO75841 260 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 OR2B8PP59922 312 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 RPL8P62917 257 aaKnown RBP9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 SLC35B1P78383 322 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 TCTEX1D1Q8N7M0 179 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 OR5T1Q8NG75 326 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM167AQ8TBQ9 72 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 AIFM2Q9BRQ8 373 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 COMMD9Q9P000 198 aa9.2□□□□□ -0.94
DEPDC4-202ENST00000378244 HMX3A6NHT5 357 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 SOX15O60248 233 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 RBMXL2O75526 392 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 NDUFB6O95139 128 aa9.19□□□□□ -0.94
DEPDC4-202ENST00000378244 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms