RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 FGF9P31371 208 aaPredicted RBP13.92□□□□□ -0.18
RGP1-201ENST00000378078 LEMD1Q68G75 181 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 IGHV3-53P01767 116 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 ASIPP42127 132 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 HOGA1Q86XE5 327 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 AMELYQ99218 206 aa13.92□□□□□ -0.18
RGP1-201ENST00000378078 SYNGR3O43761 229 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 MUC1P15941 1255 aaPredicted RBP13.91□□□□□ -0.18
RGP1-201ENST00000378078 PHLDA1Q8WV24 401 aaPredicted RBP13.91□□□□□ -0.18
RGP1-201ENST00000378078 MIXL1Q9H2W2 232 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 V9GYH0 126 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 ASXL3Q9C0F0 2248 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 OR10S1Q8NGN2 331 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 PKIAP61925 76 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 BHLHA9Q7RTU4 235 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 SCGB3A1Q96QR1 104 aa13.91□□□□□ -0.18
RGP1-201ENST00000378078 ZNF385CQ66K41 422 aaPredicted RBP13.9□□□□□ -0.18
RGP1-201ENST00000378078 UNC13CQ8NB66 2214 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 BCL2P10415 239 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 P2RY6Q15077 328 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 DDA1Q9BW61 102 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 DNAJC13O75165 2243 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 H0Y980 276 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 TRGC1P0CF51 173 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 ZNF818PQ6ZRF7 136 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 C1QL2Q7Z5L3 287 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 MARS2Q96GW9 593 aaKnown RBP13.9□□□□□ -0.18
RGP1-201ENST00000378078 PEX7O00628 323 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 SAP30O75446 220 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 C1QAP02745 245 aa13.9□□□□□ -0.18
RGP1-201ENST00000378078 HMSDA8MTL9 139 aa13.9□□□□□ -0.19
RGP1-201ENST00000378078 HBBP68871 147 aa13.9□□□□□ -0.19
RGP1-201ENST00000378078 COPS9Q8WXC6 57 aa13.9□□□□□ -0.19
RGP1-201ENST00000378078 ATAD5Q96QE3 1844 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 A0A0G2JMM0 328 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 A0A1W2PPB8 328 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 A0A1W2PRS3 328 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 KIR3DP1A8MWS1 328 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 CELA3BP08861 270 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 STRCQ7RTU9 1775 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 TRAV30A0A087WSZ9 112 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 RFPL3SP0C7P2 107 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 SIRT4Q9Y6E7 314 aaPredicted RBP13.89□□□□□ -0.19
RGP1-201ENST00000378078 GATA2P23769 480 aaPredicted RBP13.89□□□□□ -0.19
RGP1-201ENST00000378078 REC114Q7Z4M0 266 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 TXNDC17Q9BRA2 123 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 LNP1A1A4G5 178 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 FBLN7Q53RD9 439 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 PARD6GQ9BYG4 376 aaPredicted RBP13.89□□□□□ -0.19
RGP1-201ENST00000378078 ZNF585BQ52M93 769 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 TEX45Q8NA69 505 aa13.89□□□□□ -0.19
RGP1-201ENST00000378078 RBMY1BA6NDE4 496 aaKnown RBP13.88□□□□□ -0.19
RGP1-201ENST00000378078 RBMY1EA6NEQ0 496 aaKnown RBP13.88□□□□□ -0.19
RGP1-201ENST00000378078 RBMY1DP0C7P1 496 aaKnown RBP13.88□□□□□ -0.19
RGP1-201ENST00000378078 RBMY1A1P0DJD3 496 aaKnown RBP13.88□□□□□ -0.19
RGP1-201ENST00000378078 RBMY1CP0DJD4 496 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 FGF5P12034 268 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 PPP1R32Q7Z5V6 425 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 ARPC1AQ92747 370 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 OR9G1Q8NH87 305 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 ZNF250P15622 560 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 WDR34Q96EX3 536 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 KCNS1Q96KK3 526 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 ERVK11-1P61568 191 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 TMEM219Q86XT9 240 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 OR5A1Q8NGJ0 315 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 MYOFQ9NZM1 2061 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 TNFSF10P50591 281 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 FAM216BQ8N7L0 139 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 TMEM183AQ8IXX5 376 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 OR10AG1Q8NH19 301 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 SAP25Q8TEE9 199 aa13.88□□□□□ -0.19
RGP1-201ENST00000378078 TAF15Q92804 592 aaKnown RBP eCLIP13.88□□□□□ -0.19
RGP1-201ENST00000378078 B9A039 149 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 SDF2L1Q9HCN8 221 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 FAM27BQ5VT28 67 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 MARVELD1Q9BSK0 173 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 SLC25A20O43772 301 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 TNFRSF9Q07011 255 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 SFXN3Q9BWM7 321 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 SLC17A3O00476 420 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 CD160O95971 181 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 SMIM13P0DJ93 91 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 ZNF79Q15937 498 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 PEMTQ9UBM1 199 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
RGP1-201ENST00000378078 MOSPD3O75425 235 aa13.86□□□□□ -0.19
RGP1-201ENST00000378078 SEC11BP0C7V7 166 aa13.86□□□□□ -0.19
RGP1-201ENST00000378078 GNG5P63218 68 aa13.86□□□□□ -0.19
RGP1-201ENST00000378078 CENPWQ5EE01 88 aa13.86□□□□□ -0.19
RGP1-201ENST00000378078 SAPCD1Q5SSQ6 148 aa13.86□□□□□ -0.19
RGP1-201ENST00000378078 HS3ST3B1Q9Y662 390 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms