RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MIC13Q5XKP0 118 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 TBX6O95947 436 aaPredicted RBP5.65□□□□□ -1.5
UBR4-204ENST00000375254 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
UBR4-204ENST00000375254 PIN1P1O15428 100 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 IGLV3-27P01718 113 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 ADMP35318 185 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 LY6G6FQ5SQ64 297 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 NPC2P61916 151 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 OCC1Q8TAD7 63 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 APC2O95996 2303 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 YPEL1O60688 119 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 CDCP2Q5VXM1 449 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 YPEL2Q96QA6 119 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 C3orf79P0CE67 100 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 FAM90A2PQ658T7 463 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 CNEP1R1Q8N9A8 125 aa5.65□□□□□ -1.5
UBR4-204ENST00000375254 BTCP35070 178 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 TNXAQ16473 311 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 GOLT1AQ6ZVE7 132 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 ANKRD29Q8N6D5 301 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 OTORQ9NRC9 128 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 NPFFR1Q9GZQ6 430 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 ABCA9Q8IUA7 1624 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 TRBV7-9A0A0J9YWB2 115 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 PTGDSP41222 190 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 NWD1Q149M9 1564 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 SYNGR3O43761 229 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 C1QCP02747 245 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 PDE6HQ13956 83 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 ZIC1Q15915 447 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 ABHD14AQ9BUJ0 271 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 TSPOAP1O95153 1857 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 J3QT63 122 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 RFESDQ8TAC1 157 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 NDUFB3O43676 98 aa5.65□□□□□ -1.51
UBR4-204ENST00000375254 KIR2DL5BA0A0G2JN68 375 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 KIR2DL5BA0A0G2JPC4 375 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 ZNF815PA8K554 130 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 GNG5P63218 68 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 KIR2DL5AQ8N109 375 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 SS18L2Q9UHA2 77 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 NUP35Q8NFH5 326 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 FZR1Q9UM11 496 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 H1FXQ92522 213 aaKnown RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 TMEM86BQ8N661 226 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 CLEC7AQ9BXN2 247 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 IGFBP3P17936 291 aaPredicted RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 PRTN3P24158 256 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 WDR82Q6UXN9 313 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 PTH2Q96A98 100 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 VWDEQ8N2E2 1590 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 MNX1P50219 401 aaPredicted RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 INO80CQ6PI98 192 aaPredicted RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 ZNF525Q8N782 197 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 FBXL15Q9H469 300 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 PFN1P07737 140 aaKnown RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 VPREB1P12018 145 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 MDP1Q86V88 176 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 KLF4O43474 513 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 CCDC144NLQ6NUI1 221 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 FNDC10F2Z333 226 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 WISP3O95389 354 aaPredicted RBP5.64□□□□□ -1.51
UBR4-204ENST00000375254 CCL2P13500 99 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 TMEM256Q8N2U0 113 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 TMEM178AQ8NBL3 297 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 SLIT3O75094 1523 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 ATOX1O00244 68 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 SPATA25Q9BR10 227 aa5.64□□□□□ -1.51
UBR4-204ENST00000375254 MMP17Q9ULZ9 603 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 PROCRQ9UNN8 238 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 WNT9BO14905 357 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 ZNF441Q8N8Z8 693 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 WFDC1Q9HC57 220 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 MESP2Q0VG99 397 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 CXCL5P42830 114 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 EMDP50402 254 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 FGF11Q92914 225 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 FABP5P3A8MUU1 101 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 HIST1H4AP62805 103 aaKnown RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 VKORC1Q9BQB6 163 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 IQCF6A8MYZ5 107 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 C1QL3Q5VWW1 255 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 VSTM2LQ96N03 204 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 A0A0G2JK05 382 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 A0A1W2PPE3 182 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 CEP170BQ9Y4F5 1589 aaPredicted RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 TRAV26-1A0A087WT03 109 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 CRXO43186 299 aaPredicted RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 TGFAP01135 160 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 Q96M66 194 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 TRAV21A0A0B4J279 112 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 METTL26Q96S19 204 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 RBM3P98179 157 aaKnown RBP5.63□□□□□ -1.51
UBR4-204ENST00000375254 NABP2Q9BQ15 211 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 TIMM23O14925 209 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms