RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 STUMQ69YW2 141 aa10.12□□□□□ -0.79
UBR4-203ENST00000375225 NEIL1Q96FI4 390 aaPredicted RBP10.12□□□□□ -0.79
UBR4-203ENST00000375225 GAL3ST2Q9H3Q3 398 aa10.12□□□□□ -0.79
UBR4-203ENST00000375225 TMEM140Q9NV12 185 aa10.12□□□□□ -0.79
UBR4-203ENST00000375225 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
UBR4-203ENST00000375225 PRNDQ9UKY0 176 aa10.12□□□□□ -0.79
UBR4-203ENST00000375225 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
UBR4-203ENST00000375225 PCP4L1A6NKN8 68 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 IGHV1-46P01743 117 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 TFF1P04155 84 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 CD55P08174 381 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 CGB3P0DN86 165 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 CGB7P0DN87 165 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 MDKP21741 143 aaPredicted RBP10.11□□□□□ -0.79
UBR4-203ENST00000375225 S100A2P29034 98 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 MRPS11P82912 194 aaKnown RBP10.11□□□□□ -0.79
UBR4-203ENST00000375225 ZNRF1Q8ND25 227 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 Q8WTZ3 238 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 DCTN5Q9BTE1 182 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 GCM1Q9NP62 436 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
UBR4-203ENST00000375225 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
UBR4-203ENST00000375225 TLN1Q9Y490 2541 aaKnown RBP10.1□□□□□ -0.79
UBR4-203ENST00000375225 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 TRAV38-1A0A0B4J264 116 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 CA7P43166 264 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 VDAC2P45880 294 aaPredicted RBP10.1□□□□□ -0.79
UBR4-203ENST00000375225 RELBQ01201 579 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
UBR4-203ENST00000375225 TFF3Q07654 80 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 HNF4GQ14541 408 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 ADIRFQ15847 76 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 BSXQ3C1V8 233 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 TEX36Q5VZQ5 186 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 WDR25Q64LD2 544 aaPredicted RBP10.1□□□□□ -0.79
UBR4-203ENST00000375225 SSX9Q7RTT3 188 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 OR4F5Q8NH21 305 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 DDB2Q92466 427 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 OR4F4Q96R69 305 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 TCF19Q9Y242 345 aa10.1□□□□□ -0.79
UBR4-203ENST00000375225 H7BYZ3 331 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 PPP1R2P9O14990 202 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 CD81P60033 236 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 HSPE1P61604 102 aaKnown RBP10.09□□□□□ -0.79
UBR4-203ENST00000375225 POU2AF1Q16633 256 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 MSMPQ1L6U9 139 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 C17orf58Q2M2W7 97 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 RPL39P5Q59GN2 51 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
UBR4-203ENST00000375225 KCNIP4Q6PIL6 250 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 SSX7Q7RTT5 188 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 GAFA1Q96PS6 74 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 TMEM204Q9BSN7 226 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 LINC00312Q9Y6C7 94 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 URGCP-MRPS24S4R325 110 aa10.09□□□□□ -0.79
UBR4-203ENST00000375225 CXorf1O96002 111 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 IGKV1D-33P01593 117 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 IGKV1-33P01594 117 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 APOA2P02652 100 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 HOXA5P20719 270 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 NPY1RP25929 384 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 TLE1Q04724 770 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 SPINK9Q5DT21 86 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 ZNF788Q6ZQV5 615 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 TGIF2LYQ8IUE0 185 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 LYG1Q8N1E2 194 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 SLC24A4Q8NFF2 622 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 CHODLQ9H9P2 273 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
UBR4-203ENST00000375225 MAP1BP46821 2468 aaKnown RBP10.08□□□□□ -0.8
UBR4-203ENST00000375225 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 TGIF2-C20orf24A0A0A6YYL0 155 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 C11orf94C9JXX5 98 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 CCL21O00585 134 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 SRP14P37108 136 aaKnown RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 CDX1P47902 265 aaPredicted RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 ERVFRD-1P60508 538 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 CT45A1Q5HYN5 189 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 CT45A3Q8NHU0 189 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 RPUSD4Q96CM3 377 aaKnown RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 RHOVQ96L33 236 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 PARLQ9H300 379 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 PLEKHA3Q9HB20 300 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 RPUSD1Q9UJJ7 312 aaKnown RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 ATMQ13315 3056 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 SPENQ96T58 3664 aaKnown RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 PAGE4O60829 102 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 CXCL1P09341 107 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms