RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 NPIPB5A8MRT5 1133 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 BMPR1BO00238 502 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CRYGCP07315 174 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 MAS1LP35410 378 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ARPC4P59998 168 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 ANKRD13BQ86YJ7 626 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 NECAP1Q8NC96 275 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR5AP2Q8NGF4 316 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 OR13F1Q8NGS4 319 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 SLC2A9Q9NRM0 540 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 C19orf73Q9NVV2 129 aa10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1A-202ENST00000366159 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CGB1A6NKQ9 187 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 MPPED1O15442 326 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.752e-7■■■■□ 22.6
TNFRSF1A-202ENST00000366159 ACTL6BO94805 426 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CBX5P45973 191 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 ATP5G2Q06055 141 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 POU2AF1Q16633 256 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TIMM50Q3ZCQ8 353 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 DHRS11Q6UWP2 260 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 ADAMTSL5Q6ZMM2 481 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SLC25A42Q86VD7 318 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FANCD2OSQ96PS1 177 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 ZNF257Q9Y2Q1 563 aa10.39□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TNFSF12O43508 249 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 AIREO43918 545 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 HRASP01112 189 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 IGHV4-30-4P0DP06 118 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CTRB1P17538 263 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 NAT1P18440 290 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 KIR2DS2P43631 304 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 EXOSC2Q13868 293 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RPEL1Q2QD12 228 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 C19orf35Q6ZS72 473 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TSPAN14Q8NG11 270 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 S100A16Q96FQ6 103 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TM2D3Q9BRN9 247 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RSRP1Q9BUV0 290 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SLC5A7Q9GZV3 580 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RYR2Q92736 4967 aa10.38□□□□□ -0.75
TNFRSF1A-202ENST00000366159 A0A087WXM4 84 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 MEIS3P1A6NDR6 274 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 H0Y980 276 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 OR2J3O76001 311 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FGF2P09038 288 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 MYOD1P15172 320 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 AREGP15514 252 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 GNRHRP30968 328 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TATDN3Q17R31 274 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 UBE2NLQ5JXB2 153 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 OR4A47Q6IF82 309 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SPAG16Q8N0X2 631 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
TNFRSF1A-202ENST00000366159 IZUMO1RA6ND01 250 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SULT1C2O00338 296 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TNFAIP8O95379 198 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 HPRT1P00492 218 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FCER2P06734 321 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 PSMB6P28072 239 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RFX2P48378 723 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TAS2R31P59538 309 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TAS2R20P59543 309 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 LSM3P62310 102 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FAM209BQ5JX69 171 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SSX9Q7RTT3 188 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SLC25A46Q96AG3 418 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FYTTD1Q96QD9 318 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 LYSTQ99698 3801 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
TNFRSF1A-202ENST00000366159 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 PPP5D1E7EU14 171 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 LGALS9O00182 355 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 NDUFB8O95169 186 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 HLA-GP17693 338 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FXYD4P59646 89 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 OR2B8PP59922 312 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 LYSMD2Q8IV50 215 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 Q8N402 240 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 SAMD12Q8N8I0 201 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 PLEKHA2Q9HB19 425 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 FBXL7Q9UJT9 491 aa10.35□□□□□ -0.75
TNFRSF1A-202ENST00000366159 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms