RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FOXA2Q9Y261 457 aaPredicted RBP18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 TP53TG5Q9Y2B4 290 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 CEP250Q9BV73 2442 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 DSCAMO60469 2012 aa18.33■□□□□ 0.52
NKX2-1-201ENST00000354822 TRAV3A0A0B4J244 114 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 HSPE1P61604 102 aaKnown RBP18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 SPACA3Q8IXA5 215 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 LYG1Q8N1E2 194 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 OR4F5Q8NH21 305 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 LEAP2Q969E1 77 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 OR4F4Q96R69 305 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 ASPMQ8IZT6 3477 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 DSPP15924 2871 aaKnown RBP18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 A0A0G2JNJ9 132 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 PRSS46E5RG02 174 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 RRHO14718 337 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 GYPAP02724 150 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 POU2AF1Q16633 256 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 TREML4Q6UXN2 200 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 KCNIP2Q9NS61 270 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 Q9UFV3 132 aa18.32■□□□□ 0.52
NKX2-1-201ENST00000354822 CFAP47Q6ZTR5 3102 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 TRBV24-1A0A075B6N3 115 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 hADV38S2A0JD32 116 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 CCKARP32238 428 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 OR4A47Q6IF82 309 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 NPVFQ9HCQ7 196 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 TMEM14BQ9NUH8 114 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 A0A1W2PPV4 95 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 HOXA5P20719 270 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 BSXQ3C1V8 233 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 DUX4L9Q6RFH8 374 aaPredicted RBP18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 TCF23Q7RTU1 214 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 ABHD12Q8N2K0 398 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 ZNF383Q8NA42 475 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 OR10A7Q8NGE5 316 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 NEIL1Q96FI4 390 aaPredicted RBP18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 SCNM1Q9BWG6 230 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 ENY2Q9NPA8 101 aa18.31■□□□□ 0.52
NKX2-1-201ENST00000354822 PAGE4O60829 102 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 TDGF1P3P51864 188 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 ADIRFQ15847 76 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 UTF1Q5T230 341 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 RPUSD4Q96CM3 377 aaKnown RBP18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 PARLQ9H300 379 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 RPUSD1Q9UJJ7 312 aaKnown RBP18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 NKX6-3A6NJ46 265 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 FAM216BQ8N7L0 139 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 LINC00312Q9Y6C7 94 aa18.3■□□□□ 0.52
NKX2-1-201ENST00000354822 DSCAML1Q8TD84 2053 aa18.29■□□□□ 0.52
NKX2-1-201ENST00000354822 SLC25A48Q6ZT89 311 aaKnown RBP18.29■□□□□ 0.52
NKX2-1-201ENST00000354822 C17orf100A8MU93 164 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 PDE6DO43924 150 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 VENTXO95231 258 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 RPL23P62829 140 aaKnown RBP18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 MEF2CQ06413 473 aaPredicted RBP18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 TBR1Q16650 682 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 WFDC8Q8IUA0 241 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 GATAD1Q8WUU5 269 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 TXNDC17Q9BRA2 123 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 MS4A5Q9H3V2 200 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 PRNDQ9UKY0 176 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 TRAV38-1A0A0B4J264 116 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 VSTM5A8MXK1 200 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 OR4A8P0C604 315 aa18.28■□□□□ 0.52
NKX2-1-201ENST00000354822 TANC2Q9HCD6 1990 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 DPRXA6NFQ7 191 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 C11orf94C9JXX5 98 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 NPY1RP25929 384 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 CDX1P47902 265 aaPredicted RBP18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 ADIPOQQ15848 244 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 RTL8BQ17RB0 113 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 CISD2Q8N5K1 135 aaKnown RBP18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 Q8NA96 180 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 SLC24A4Q8NFF2 622 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 TMEM170AQ8WVE7 144 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 MGST2Q99735 147 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 GAL3ST2Q9H3Q3 398 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 JKAMPQ9P055 326 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 DOK5Q9P104 306 aa18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 LSM4Q9Y4Z0 139 aaKnown RBP18.27■□□□□ 0.52
NKX2-1-201ENST00000354822 TMPRSS2O15393 492 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 TRGC2P03986 189 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 PLA2G5P39877 138 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 CCL8P80075 99 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 RAB31Q13636 194 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 ANAPC16Q96DE5 110 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 GGTLC1Q9BX51 225 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 ZNF257Q9Y2Q1 563 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 PXMP4Q9Y6I8 212 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 AKAP13Q12802 2813 aa18.27■□□□□ 0.51
NKX2-1-201ENST00000354822 FNDC10F2Z333 226 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 K7ENP7 123 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 YIF1AO95070 293 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 IL6RP08887 468 aaPredicted RBP18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 GNG10P50151 68 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 NDUFA6P56556 154 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 GFRALQ6UXV0 394 aa18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 ZCCHC14Q8WYQ9 949 aaKnown RBP18.26■□□□□ 0.51
NKX2-1-201ENST00000354822 DYSFO75923 2080 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms