RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 OR4F17Q8NGA8 305 aa4.34□□□□□ -1.72
SKP1-202ENST00000353411 OR5P3Q8WZ94 311 aa4.34□□□□□ -1.72
SKP1-202ENST00000353411 CREBBPQ92793 2442 aa4.34□□□□□ -1.72
SKP1-202ENST00000353411 KIF26AQ9ULI4 1882 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 NKX2-8O15522 239 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 SYNGR1O43759 233 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 REG1AP05451 166 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TIMP3P35625 211 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 GPR6P46095 362 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 ATG4DQ86TL0 474 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 LINC00470Q9BZP3 86 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 UBE2ZQ9H832 354 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 HILPDAQ9Y5L2 63 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 DUX1O43812 170 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 IL18BPO95998 194 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TMEM52BQ4KMG9 183 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TCF24Q7RTU0 167 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 MGST2Q99735 147 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 NLRC5Q86WI3 1866 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 VWA8A3KMH1 1905 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 LHX2P50458 406 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 ZNF137PP52743 207 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 RBX1P62877 108 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 ASCL4Q6XD76 172 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TMEFF1Q8IYR6 380 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 ZADH2Q8N4Q0 377 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 APOBEC4Q8WW27 367 aaKnown RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 SSMEM1Q8WWF3 244 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 A0A0U1RQV5 110 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OOEPA6NGQ2 149 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A20PA6NIJ5 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A8PA6NJQ4 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A7PA6NKC0 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A22PA8MWA6 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A12PA8MX19 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A23PA8MXZ1 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A13PP0C7W8 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM90A24PP0C7X0 464 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 IFITM1P13164 125 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 CRYBB3P26998 211 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 CCL20P78556 96 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 RHBDD2Q6NTF9 364 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 SHISA6Q6ZSJ9 500 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 LYG1Q8N1E2 194 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OR11H1Q8NG94 326 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OR1K1Q8NGR3 316 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 OR11H2Q8NH07 326 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 LYPD6BQ8NI32 183 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 DLX4Q92988 240 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 FBLN5Q9UBX5 448 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 NYNRINQ9P2P1 1898 aaKnown RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 FAM231BA6NCW3 169 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 C9JQL5 133 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 C18orf12Q96KH6 178 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 UBR3Q6ZT12 1888 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TICRRQ7Z2Z1 1910 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TIAF1O95411 115 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 ARG2P78540 354 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 BOD1L2Q8IYS8 172 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 C12orf76Q8N812 135 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 AICDAQ9GZX7 198 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 SERGEFQ9UGK8 458 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TNS1Q9HBL0 1735 aaKnown RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PPC4 97 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 DEFA4P12838 97 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 CKS2P33552 79 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TBR1Q16650 682 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TSACCQ96A04 125 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 GREB1LQ9C091 1923 aaPredicted RBP4.33□□□□□ -1.72
SKP1-202ENST00000353411 ARHGAP32A7KAX9 2087 aa4.33□□□□□ -1.72
SKP1-202ENST00000353411 TOMM40O96008 361 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 FXYD3Q14802 87 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 PSG3Q16557 428 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 ZNF718Q3SXZ3 478 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 ABHD17BQ5VST6 288 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TMEM126AQ9H061 195 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 METTL12A8MUP2 240 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 NTN1O95631 604 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 ITGBL1O95965 494 aaPredicted RBP4.32□□□□□ -1.72
SKP1-202ENST00000353411 PMVKQ15126 192 aa4.32□□□□□ -1.72
SKP1-202ENST00000353411 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms