RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
CXCL12-201ENST00000343575 PPIAL4GP0DN37 164 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-201ENST00000343575 DLX1P56177 255 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 RND3P61587 244 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 EIF4EBP1Q13541 118 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-201ENST00000343575 Q3ZCU0 254 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 PYY3Q5JQD4 70 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 STX12Q86Y82 276 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 DRAM1Q8N682 238 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 RNASE11Q8TAA1 199 aaKnown RBP12.01□□□□□ -0.49
CXCL12-201ENST00000343575 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 PSG11Q9UQ72 335 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 PPP1R2P9O14990 202 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 MPPED1O15442 326 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 PGLYRP1O75594 196 aaPredicted RBP12□□□□□ -0.49
CXCL12-201ENST00000343575 HBE1P02100 147 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 OR13C7P0DN81 318 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 FAM213BQ8TBF2 198 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
CXCL12-201ENST00000343575 C18orf12Q96KH6 178 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 PIMREGQ9BSJ6 248 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 OR2D2Q9H210 308 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 DOK5Q9P104 306 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 PUS1Q9Y606 427 aaKnown RBP eCLIP12□□□□□ -0.49
CXCL12-201ENST00000343575 CSMD1Q96PZ7 3565 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 ITGB1BP1O14713 200 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 TNFSF12O43508 249 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 CDS2O95674 445 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 IGHV1-8P0DP01 117 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 TAGLN2P37802 199 aaKnown RBP12□□□□□ -0.49
CXCL12-201ENST00000343575 NDUFA6P56556 154 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 UBE2KP61086 200 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 PKIAP61925 76 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 SP6Q3SY56 376 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 ODF3L1Q8IXM7 274 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 Q8N7P7 452 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
CXCL12-201ENST00000343575 TVP23CQ96ET8 276 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 TP53RKQ96S44 253 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 SLC25A31Q9H0C2 315 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 RAB9BQ9NP90 201 aa12□□□□□ -0.49
CXCL12-201ENST00000343575 WNK2Q9Y3S1 2297 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 A0A087X0M5 115 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 A0A1B0GX30 115 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 H3BQ15 152 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 PITX3O75364 302 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 YIF1AO95070 293 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 OR5AC1P0C628 307 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 LINC00205P59089 165 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF674Q2M3X9 581 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 DEFB113Q30KQ7 82 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 TBC1D26Q86UD7 250 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF645Q8N7E2 425 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF383Q8NA42 475 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 TMEM242Q9NWH2 141 aa11.99□□□□□ -0.49
CXCL12-201ENST00000343575 RBM7Q9Y580 266 aaKnown RBP11.99□□□□□ -0.49
CXCL12-201ENST00000343575 A0A096LNT2 108 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 TSTD3H0UI37 97 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 MMP9P14780 707 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-201ENST00000343575 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 ZNF506Q5JVG8 444 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
CXCL12-201ENST00000343575 NIPSNAP3BQ9BS92 247 aa11.98□□□□□ -0.49
CXCL12-201ENST00000343575 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-201ENST00000343575 LIPFP07098 398 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 GNG10P50151 68 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 BRWD1-AS2P59051 145 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 RAB4BP61018 213 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 LCN2P80188 198 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 ELOBQ15370 118 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 CLEC12BQ2HXU8 276 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 C9orf152Q5JTZ5 239 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-201ENST00000343575 SSX9Q7RTT3 188 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 RAB39BQ96DA2 213 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 MSI2Q96DH6 328 aaKnown RBP11.97□□□□□ -0.49
CXCL12-201ENST00000343575 ABHD14AQ9BUJ0 271 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 KCNS2Q9ULS6 477 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 MAP1AP78559 2803 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-201ENST00000343575 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 IFITM10A6NMD0 228 aa11.97□□□□□ -0.49
CXCL12-201ENST00000343575 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms