RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 TMEM147Q9BVK8 224 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 TIMM9Q9Y5J7 89 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 TNFAIP6P98066 277 aaPredicted RBP16.61■□□□□ 0.25
SPG7-202ENST00000341316 TMEM241Q24JQ0 296 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 HIST1H2BLQ99880 126 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 DCAF16Q9NXF7 216 aa16.61■□□□□ 0.25
SPG7-202ENST00000341316 DSCAMO60469 2012 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 A0A0G2JNJ9 132 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 KBTBD11O94819 623 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 PMS2P11Q13670 270 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 RNF7Q9UBF6 113 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 Q9UFV3 132 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 GAB2Q9UQC2 676 aa16.6■□□□□ 0.25
SPG7-202ENST00000341316 C15orf62A8K5M9 175 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 HPRT1P00492 218 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 PFN1P07737 140 aaKnown RBP16.59■□□□□ 0.25
SPG7-202ENST00000341316 FGF7P21781 194 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 ATP6V1FQ16864 119 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 GATAD1Q8WUU5 269 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 OR6C3Q9NZP0 311 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 PITPNC1Q9UKF7 332 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 CUL9Q8IWT3 2517 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 RPL23P62829 140 aaKnown RBP16.59■□□□□ 0.25
SPG7-202ENST00000341316 BSXQ3C1V8 233 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 STUMQ69YW2 141 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 TCF23Q7RTU1 214 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 CIB3Q96Q77 187 aaPredicted RBP16.59■□□□□ 0.25
SPG7-202ENST00000341316 SRD5A3Q9H8P0 318 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 IL19Q9UHD0 177 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 TP53TG5Q9Y2B4 290 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 KALRNO60229 2985 aa16.59■□□□□ 0.25
SPG7-202ENST00000341316 TRAV3A0A0B4J244 114 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 MKRN2OSH3BPM6 223 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 TDGF1P3P51864 188 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 CT45A1Q5HYN5 189 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 DNLZQ5SXM8 178 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 CISD2Q8N5K1 135 aaKnown RBP16.58■□□□□ 0.25
SPG7-202ENST00000341316 CT45A3Q8NHU0 189 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 SDSLQ96GA7 329 aa16.58■□□□□ 0.25
SPG7-202ENST00000341316 CTXND1A0A1B0GTU2 59 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 PSMB3P49720 205 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 VWC2Q2TAL6 325 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 AARDQ4LEZ3 155 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 Q8NA96 180 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 GAFA1Q96PS6 74 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 CCL13Q99616 98 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 PARLQ9H300 379 aa16.58■□□□□ 0.24
SPG7-202ENST00000341316 SMCO3A2RU48 225 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 GNB2P62879 340 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 PRAMEF5Q5TYX0 476 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 ZNF600Q6ZNG1 722 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 FAM216BQ8N7L0 139 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 OR10G9Q8NGN4 311 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 OR10G7Q8NGN6 311 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 DDB2Q92466 427 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 SNRNP40Q96DI7 357 aaKnown RBP16.57■□□□□ 0.24
SPG7-202ENST00000341316 NPCDR1Q9BY65 106 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 GYPAP02724 150 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 SELENOVP59797 346 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 TMEM183AQ8IXX5 376 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 OR4F5Q8NH21 305 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 C14orf144Q96I85 54 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 OR4F4Q96R69 305 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 PYGO2Q9BRQ0 406 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 PRO1933Q9H354 126 aa16.57■□□□□ 0.24
SPG7-202ENST00000341316 KBTBD11-OT1A0A1B0GTJ5 212 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 TMEM250H0YL14 139 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 H7BYZ3 331 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 DEFA4P12838 97 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 GALR1P47211 349 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 FFAR4Q5NUL3 377 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 S1PR3Q99500 378 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 SH3BGRL2Q9UJC5 107 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 CLEC12BQ2HXU8 276 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 Q8N7P7 452 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 OR51G1Q8NGK1 321 aa16.56■□□□□ 0.24
SPG7-202ENST00000341316 RAI1Q7Z5J4 1906 aaPredicted RBP16.55■□□□□ 0.24
SPG7-202ENST00000341316 SAA2-SAA4A0A096LPE2 208 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 RBFOX2O43251 390 aaKnown RBP eCLIP16.55■□□□□ 0.24
SPG7-202ENST00000341316 MMP23AO75900 390 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 SAA2P0DJI9 122 aaPredicted RBP16.55■□□□□ 0.24
SPG7-202ENST00000341316 PKIAP61925 76 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 RELBQ01201 579 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 WFDC8Q8IUA0 241 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 ZCCHC24Q8N2G6 241 aaKnown RBP16.55■□□□□ 0.24
SPG7-202ENST00000341316 FAM216AQ8WUB2 273 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 NCOR1P1Q9H4R4 102 aa16.55■□□□□ 0.24
SPG7-202ENST00000341316 DPRXA6NFQ7 191 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 CCL8P80075 99 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 UNQ6494/PRO21346Q6UXR6 183 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 NUP37Q8NFH4 326 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 OR4A16Q8NH70 328 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 OR5B12Q96R08 314 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 TMEM140Q9NV12 185 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 RELNP78509 3460 aa16.54■□□□□ 0.24
SPG7-202ENST00000341316 FAM90A9PA6NNJ1 464 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms