RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PGLYRP1O75594 196 aaPredicted RBP14.96□□□□□ -0.01
SYNE4-202ENST00000340477 F2RP25116 425 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 PHLDA2Q53GA4 152 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 STEAP1BQ6NZ63 245 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 DMBX1Q8NFW5 382 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 TMEM167AQ8TBQ9 72 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 RSRP1Q9BUV0 290 aa14.96□□□□□ -0.01
SYNE4-202ENST00000340477 TINAGL1Q9GZM7 467 aaPredicted RBP14.96□□□□□ -0.01
SYNE4-202ENST00000340477 MSGN1A6NI15 193 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 SOX15O60248 233 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 TRGV3P03979 118 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 TNFSF8P32971 234 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 BRWD1-AS2P59051 145 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 SSBP2P81877 361 aaPredicted RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 DEFB136Q30KP8 78 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 SCGB2B2Q4G0G5 96 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 OR4A47Q6IF82 309 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 ETV3LQ6ZN32 361 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 C1QL4Q86Z23 238 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 MRPL41Q8IXM3 137 aaKnown RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 PUSL1Q8N0Z8 303 aaKnown RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 LINC00482Q8N8I6 264 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 WFDC9Q8NEX5 89 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 DGCR14Q96DF8 476 aaKnown RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 ZNF486Q96H40 463 aaPredicted RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 RAX2Q96IS3 184 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 MS4A10Q96PG2 267 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 MCRIP2Q9BUT9 160 aaKnown RBP14.95□□□□□ -0.02
SYNE4-202ENST00000340477 COA4Q9NYJ1 87 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 BET1LQ9NYM9 111 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 NDUFA13Q9P0J0 144 aa14.95□□□□□ -0.02
SYNE4-202ENST00000340477 NOTCH1P46531 2555 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 G3V4G9 280 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 S1PR2O95136 353 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 CD74P04233 296 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 AKAIN1P0CW23 69 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 ECI1P42126 302 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 RPL27AP46776 148 aaKnown RBP14.94□□□□□ -0.02
SYNE4-202ENST00000340477 RPL8P62917 257 aaKnown RBP14.94□□□□□ -0.02
SYNE4-202ENST00000340477 DEFA6Q01524 100 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 SLC25A42Q86VD7 318 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 OR5T1Q8NG75 326 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 CASTOR1Q8WTX7 329 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 DPF1Q92782 380 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 OR5B12Q96R08 314 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 P2RX4Q99571 388 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 GNB4Q9HAV0 340 aa14.94□□□□□ -0.02
SYNE4-202ENST00000340477 TNCP24821 2201 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 A0A0G2JLM5 398 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 C13orf42A0A1B0GVH6 325 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 DPPA5A6NC42 116 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 GSTZ1O43708 216 aaPredicted RBP14.93□□□□□ -0.02
SYNE4-202ENST00000340477 OR8U8P0C7N1 319 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 APELAP0DMC3 54 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 PPP5CP53041 499 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 RUNX1Q01196 453 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 POU2AF1Q16633 256 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 SAMD5Q5TGI4 173 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 TBC1D26Q86UD7 250 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 OR11H1Q8NG94 326 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 ZFAND1Q8TCF1 268 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 DUX3Q96PT4 197 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 SLC2A9Q9NRM0 540 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 TMEM140Q9NV12 185 aa14.93□□□□□ -0.02
SYNE4-202ENST00000340477 LGALS1P09382 135 aaKnown RBP14.92□□□□□ -0.02
SYNE4-202ENST00000340477 OR9G9P0C7N8 305 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 IGLL1P15814 213 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 HLA-GP17693 338 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 LPAR6P43657 344 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 ZNF616Q08AN1 781 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 MRGPRG-AS1Q2M3A8 158 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 LHFPL1Q86WI0 220 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 CCDC71LQ8N9Z2 235 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 OR1N2Q8NGR9 330 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 TERB2Q8NHR7 220 aa14.92□□□□□ -0.02
SYNE4-202ENST00000340477 FYTTD1Q96QD9 318 aaKnown RBP14.92□□□□□ -0.02
SYNE4-202ENST00000340477 FAM212BQ9NTI7 297 aaPredicted RBP14.92□□□□□ -0.02
SYNE4-202ENST00000340477 MARCH11A6NNE9 402 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 PYDC2Q56P42 97 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 OXLD1Q5BKU9 147 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 SPANXN2Q5MJ10 180 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 C10orf55Q5SWW7 151 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 OR4D10Q8NGI6 311 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 PRRT1Q99946 306 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 COMMD5Q9GZQ3 224 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 COPZ2Q9P299 210 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 C14orf166Q9Y224 244 aaKnown RBP14.91□□□□□ -0.02
SYNE4-202ENST00000340477 NOTCH3Q9UM47 2321 aa14.91□□□□□ -0.02
SYNE4-202ENST00000340477 MEGF8Q7Z7M0 2845 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 I3L521 148 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 BRI3O95415 125 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 DHFRP00374 187 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 IGHV3-11P01762 117 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 SERPINE2P07093 398 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 FAUP35544 74 aaKnown RBP14.9□□□□□ -0.02
SYNE4-202ENST00000340477 PIGPP57054 158 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 AP3S2P59780 193 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 RND3P61587 244 aa14.9□□□□□ -0.02
SYNE4-202ENST00000340477 KIAA0141Q14154 515 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms