RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FAM96BQ9Y3D0 163 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 IGHV3-72A0A0B4J1Y9 119 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 RAB19A4D1S5 217 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 GPR6P46095 362 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 F2RL1P55085 397 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 ARF6P62330 175 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 ZNF429Q86V71 674 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 TGIF2LXQ8IUE1 241 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 SCGB1C1Q8TD33 95 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 HINT2Q9BX68 163 aa18.21■□□□□ 0.51
PDLIM2-203ENST00000339162 C15orf62A8K5M9 175 aa18.21■□□□□ 0.5
PDLIM2-203ENST00000339162 SAA1P0DJI8 122 aaPredicted RBP18.21■□□□□ 0.5
PDLIM2-203ENST00000339162 ARHGDIBP52566 201 aa18.21■□□□□ 0.5
PDLIM2-203ENST00000339162 HARBI1Q96MB7 349 aa18.21■□□□□ 0.5
PDLIM2-203ENST00000339162 TNCP24821 2201 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 A0A1W2PPH5 198 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 IFNA10P01566 189 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 HOXA1P49639 335 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 POU2AF1Q16633 256 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 DHRS7BQ6IAN0 325 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 OR10P1Q8NGE3 313 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 OR52E5Q8NH55 327 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 C8orf46Q8TAG6 207 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 SSBP3Q9BWW4 388 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 TMEM14BQ9NUH8 114 aa18.2■□□□□ 0.5
PDLIM2-203ENST00000339162 MED13LQ71F56 2210 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 LIPFP07098 398 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 VDAC2P45880 294 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 LY6G5BQ8NDX9 201 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 LHX4Q969G2 390 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 FLYWCH2Q96CP2 140 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 SIRT7Q9NRC8 400 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 RRHO14718 337 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 TSPAN15O95858 294 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 IGLV1-47P01700 117 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 RAB5CP51148 216 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 EFNA4P52798 201 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 LRRC75BQ2VPJ9 315 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 IL34Q6ZMJ4 242 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 CLEC7AQ9BXN2 247 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 HIPK2Q9H2X6 1198 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 FOXA2Q9Y261 457 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 OR51B2Q9Y5P1 312 aa18.19■□□□□ 0.5
PDLIM2-203ENST00000339162 ZNF137PP52743 207 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 HLA-DRB5Q30154 266 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 Q8N7P7 452 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 LYPD6BQ8NI32 183 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 RITA1Q96K30 269 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 WDR61Q9GZS3 305 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 UPK2O00526 184 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 IL6RP08887 468 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 HSPE1P61604 102 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 PNKDQ8N490 385 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 OSR1Q8TAX0 266 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 CLCC1Q96S66 551 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 TREM1Q9NP99 234 aa18.18■□□□□ 0.5
PDLIM2-203ENST00000339162 LOC105371242A0A075B767 164 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 ARG1P05089 322 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 PRRX1P54821 245 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 PDLIM3Q53GG5 364 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 ZNF843Q8N446 348 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 VSIRQ9H7M9 311 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 SVEP1Q4LDE5 3571 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 ENSAO43768 121 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 AKR1C8PQ5T2L2 129 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 FAM71F2Q6NXP2 309 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 UQCC3Q6UW78 93 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 TMEM170AQ8WVE7 144 aa18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 MS4A7Q9GZW8 240 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-203ENST00000339162 UMAD1C9J7I0 102 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 BUB1B-PAK6H3BSN5 160 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 TRIM77I1YAP6 450 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 APOC3P02656 99 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 IL3RAP26951 378 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 TMEM177Q53S58 311 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 OR4C13Q8NGP0 309 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 TAF15Q92804 592 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 WASHC3Q9Y3C0 194 aa18.16■□□□□ 0.5
PDLIM2-203ENST00000339162 CRYBG3Q68DQ2 2970 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 PINX1Q96BK5 328 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 UQCC1Q9NVA1 299 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 hCG_1809904A0A1W2PP81 198 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 A0A1W2PPE2 198 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 A0A1W2PR64 198 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 A0A1W2PRV1 198 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 NUDT19A8MXV4 375 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 KBTBD11O94819 623 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 OR8U8P0C7N1 319 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 ZFP36P26651 326 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 BTN1A1Q13410 526 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 PDPNQ86YL7 162 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 OR4P4Q8NGL7 312 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 TMEM147Q9BVK8 224 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 BET1LQ9NYM9 111 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 PRNDQ9UKY0 176 aa18.15■□□□□ 0.5
PDLIM2-203ENST00000339162 TMEM218A2RU14 115 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 RBP4P02753 201 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 PUSL1Q8N0Z8 303 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 TNFRSF14Q92956 283 aa18.14■□□□□ 0.49
PDLIM2-203ENST00000339162 TEX50A0A1B0GTY4 177 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms