RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ABHD14BQ96IU4 210 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 DIDO1Q9BTC0 2240 aaKnown RBP13.68□□□□□ -0.22
NPHP3-201ENST00000337331 A0A1W2PR77 199 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 FXYD3Q14802 87 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 MMD2Q8IY49 270 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 Q96M66 194 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 RNF7Q9UBF6 113 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 IGHV3OR15-7A0A075B7D8 119 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 IGKV1D-43A0A0B4J1Z2 117 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 FAM90A27PA6NNH2 459 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 S100A4P26447 101 aaKnown RBP13.68□□□□□ -0.22
NPHP3-201ENST00000337331 HTR1DP28221 377 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 TSPOP30536 169 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 HARBI1Q96MB7 349 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 WDR81Q562E7 1941 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 VENTXO95231 258 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 LYZP61626 148 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 MPV17L2Q567V2 206 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 C19orf35Q6ZS72 473 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 PRSS3P2Q8NHM4 247 aa13.68□□□□□ -0.22
NPHP3-201ENST00000337331 H0Y980 276 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 MFAP2P55001 183 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 RNF144BQ7Z419 303 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 GPR146Q96CH1 333 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 GMPPAQ96IJ6 420 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 NUDT16L1Q9BRJ7 211 aaKnown RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 GTSF1LQ9H1H1 148 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 SRSF10O75494 262 aaKnown RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 NPBWR2P48146 333 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 OR8B2Q96RD0 313 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 SAP30LQ9HAJ7 183 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 SPAARA0A1B0GVQ0 90 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 OR1B1Q8NGR6 318 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 TMEM186Q96B77 213 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 CLDN14O95500 239 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 TEPPQ6URK8 271 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 Q6ZWC4 215 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 PDPNQ86YL7 162 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 RND1Q92730 232 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
NPHP3-201ENST00000337331 RALYQ9UKM9 306 aaKnown RBP13.67□□□□□ -0.22
NPHP3-201ENST00000337331 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 HELTA6NFD8 242 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 NPIPB13A6NJU9 1138 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 LILRA1O75019 489 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 HYPMO75409 117 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 HBZP02008 142 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 MT-ND6P03923 174 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 PRDX2P32119 198 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 J3QR06 171 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 OR2J3O76001 311 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 CD1BP29016 333 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 ZNF841Q6ZN19 808 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 OR2H2O95918 312 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 OR5AL1P0C617 328 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 SAP25Q8TEE9 199 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
NPHP3-201ENST00000337331 PGLYRP1O75594 196 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-201ENST00000337331 RBX1P62877 108 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 FANCMQ8IYD8 2048 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 CA2P00918 260 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 PRSS8Q16651 343 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 COX19Q49B96 90 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 CACNA1BQ00975 2339 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 TEX50A0A1B0GTY4 177 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 LINC00114Q6XXX2 140 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 MAP1LC3CQ9BXW4 147 aa13.65□□□□□ -0.22
NPHP3-201ENST00000337331 NAPSAO96009 420 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 APELAP0DMC3 54 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 HIST1H1EP10412 219 aaKnown RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 PCOLCEQ15113 449 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 AKIRIN1Q9H9L7 192 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 GOSR1O95249 250 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 REG1BP48304 166 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 CCL8P80075 99 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 FAM214BQ7L5A3 538 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 SRXN1Q9BYN0 137 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 SHANK1Q9Y566 2161 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 H3BUT2 72 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 FABP2P12104 132 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 ATP5G3P48201 142 aa13.64□□□□□ -0.23
NPHP3-201ENST00000337331 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
NPHP3-201ENST00000337331 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms