RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ABHD12Q8N2K0 398 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 SSMEM1Q8WWF3 244 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 OR6C3Q9NZP0 311 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 GNG12Q9UBI6 72 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 IL3RAP26951 378 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 SPRNQ5BIV9 151 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 MIC13Q5XKP0 118 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 LINC01551Q86U37 167 aa14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 GMPPAQ96IJ6 420 aaPredicted RBP14.43□□□□□ -0.1
PTP4A3-201ENST00000329397 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 TRBV20OR9-2A0A075B6H5 130 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 RBFOX2O43251 390 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■□□ 15
PTP4A3-201ENST00000329397 CD59P13987 128 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 S100A7P31151 101 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 Q5PR19 223 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 HES3Q5TGS1 186 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 PRAMEF5Q5TYX0 476 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 DMRTA1Q5VZB9 504 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 LRP11Q86VZ4 500 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 ZBTB34Q8NCN2 500 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 LRRC29Q8WV35 223 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 ARL14EPLP0DKL9 152 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 TMEM170AQ8WVE7 144 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 DSCAMO60469 2012 aa14.42□□□□□ -0.1
PTP4A3-201ENST00000329397 GVINP1Q7Z2Y8 2422 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 A0A1W2PPV4 95 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 ZNF320A2RRD8 509 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 M0R1X1 148 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 AQP7O14520 342 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 CRYABP02511 175 aaKnown RBP14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 CECR9P0C854 216 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 GPR12P47775 334 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 THBS3P49746 956 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 ACTL10Q5JWF8 245 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 WFDC12Q8WWY7 111 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 TAAR6Q96RI8 345 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 TMEM208Q9BTX3 173 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 OR4A8P0C604 315 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 LINC00614P0C842 121 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 CD33P20138 364 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 ACOT6Q3I5F7 207 aaPredicted RBP14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 FER1L6-AS2Q96M78 137 aa14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 CIB3Q96Q77 187 aaPredicted RBP14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 HEYLQ9NQ87 328 aaPredicted RBP14.41□□□□□ -0.1
PTP4A3-201ENST00000329397 NUPR1O60356 82 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 MYOD1P15172 320 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 FAM201AQ5SY85 155 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 C1orf229Q6ZS94 237 aaPredicted RBP14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 FAM214BQ7L5A3 538 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 MRPL41Q8IXM3 137 aaKnown RBP14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 TMEM256Q8N2U0 113 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 ZNRF1Q8ND25 227 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 OR2Z1Q8NG97 314 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 CXXC4Q9H2H0 198 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 MS4A5Q9H3V2 200 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 DUSP13Q9UII6 198 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 SCO2A0A1W2PP80 73 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 C17orf112F2Z3M2 114 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 C15orf65H3BRN8 121 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 ITGB1BP1O14713 200 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 DUTP33316 252 aaKnown RBP14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 ZNF134P52741 427 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 VWC2Q2TAL6 325 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 TGIF2LYQ8IUE0 185 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 DEFB123Q8N688 67 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 WDR31Q8NA23 367 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 ZDHHC11Q9H8X9 412 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 WDR83OSQ9Y284 106 aa14.4□□□□□ -0.1
PTP4A3-201ENST00000329397 CDX4O14627 284 aaPredicted RBP14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 EREGO14944 169 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 GGCTO75223 188 aaKnown RBP14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 SPATA31B1PQ5VZV4 182 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 TREML4Q6UXN2 200 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 C9orf106Q8NAJ2 232 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 OR5R1Q8NH85 324 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 ADGRG4Q8IZF6 3080 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 DVL1O14640 695 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 CCL11P51671 97 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 MSMPQ1L6U9 139 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 Q6ZT83 130 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 ANAPC16Q96DE5 110 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 MGST2Q99735 147 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 CLCF1Q9UBD9 225 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 GRIFINA4D1Z8 144 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 SMIM21Q3B7S5 101 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 WDR73Q6P4I2 378 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 OR4A16Q8NH70 328 aa14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 HSD17B10Q99714 261 aaKnown RBP14.39□□□□□ -0.11
PTP4A3-201ENST00000329397 SPINT2O43291 252 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 PRDX2P32119 198 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 INO80CQ6PI98 192 aaPredicted RBP14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 SGMS2Q8NHU3 365 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 RNASE8Q8TDE3 154 aaKnown RBP14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 RYDENQ9NUL5 291 aaKnown RBP14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 NKX2-8O15522 239 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 GCH1P30793 250 aa14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 KIR2DL2P43627 348 aaPredicted RBP14.38□□□□□ -0.11
PTP4A3-201ENST00000329397 IMMP2LQ96T52 175 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms