RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PRCDQ00LT1 54 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 C1orf229Q6ZS94 237 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 Q8N9W7 124 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 CHAC2Q8WUX2 184 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 LEAP2Q969E1 77 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 GGACTQ9BVM4 153 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 OR51B2Q9Y5P1 312 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 ARID1AO14497 2285 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 ST8SIA3O43173 380 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 TSC22D2O75157 780 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 AVPP01185 164 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 IL6RP08887 468 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 SAA1P0DJI8 122 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 BTCP35070 178 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 SNCAP37840 140 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 HOXA1P49639 335 aaPredicted RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 SRSF4Q08170 494 aaKnown RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 PPP1R1AQ13522 171 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 FXYD3Q14802 87 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 OR4A47Q6IF82 309 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 TMEM65Q6PI78 240 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 FAM71E2Q8N5Q1 922 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 UBALD1Q8TB05 177 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 VN1R17PQ8TDU5 208 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 PPP1R14BQ96C90 147 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 SEC22AQ96IW7 307 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 TMEM14BQ9NUH8 114 aa4.13□□□□□ -1.75
LRIT3-201ENST00000327908 SPTAN1Q13813 2472 aaKnown RBP4.13□□□□□ -1.75
LRIT3-201ENST00000327908 A0A1W2PPE3 182 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 NKX2-1P43699 371 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TATDN3Q17R31 274 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TEX38Q6PEX7 206 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 PTPN13Q12923 2485 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 YLPM1P49750 1951 aaKnown RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TRAV41A0A0B4J266 112 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 LINC00854A0A1B0GVQ3 168 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 C5orf51A6NDU8 294 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 CEBPZOSA8MTT3 80 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 SLC25A17O43808 307 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 S1PR2O95136 353 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 IFNA17P01571 189 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 IGHV4-59P01825 116 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 CD5P06127 495 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 P0C879 139 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 BAXQ07812 192 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TNXAQ16473 311 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 ZNF585BQ52M93 769 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 PXDC1Q5TGL8 231 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 SHISA2Q6UWI4 295 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 NRARPQ7Z6K4 114 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TTC9CQ8N5M4 171 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 ZBTB8BQ8NAP8 495 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 OR4D10Q8NGI6 311 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 CASTOR1Q8WTX7 329 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 GLYATL2Q8WU03 294 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 ZNF48Q96MX3 618 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 NAV2Q8IVL1 2488 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 C13orf42A0A1B0GVH6 325 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 PSMB11A5LHX3 300 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 LINC00473A8K010 186 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 IGLV2-23P01705 113 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 REG1BP48304 166 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 HBG1P69891 147 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 HBG2P69892 147 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 HOXA4Q00056 320 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 RAB31Q13636 194 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 NMSQ5H8A3 153 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 STX12Q86Y82 276 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 RNF152Q8N8N0 203 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 SRSF12Q8WXF0 261 aaKnown RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TMEM230Q96A57 120 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 PINX1Q96BK5 328 aaKnown RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 SMIM8Q96KF7 97 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 MCRIP2Q9BUT9 160 aaKnown RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 HSPB7Q9UBY9 170 aa4.12□□□□□ -1.75
LRIT3-201ENST00000327908 HELZ2Q9BYK8 2649 aaKnown RBP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.12□□□□□ -1.75
LRIT3-201ENST00000327908 TRAV6A0A075B6T7 132 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 IGHV3OR16-10A0A075B7F0 116 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 TRBV7-1A0A0A6YYK4 115 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 HMX3A6NHT5 357 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 E5RGE8 158 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 IGLV2-14P01704 120 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 CRYGCP07315 174 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 FCGR2BP31994 310 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-201ENST00000327908 AP2S1P53680 142 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-201ENST00000327908 RPL30P62888 115 aaKnown RBP4.11□□□□□ -1.75
LRIT3-201ENST00000327908 RUNX1Q01196 453 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 C2orf83Q53S99 150 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 SAMD13Q5VXD3 122 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 GGNBP1Q5YKI7 109 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 C12orf54Q6X4T0 127 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 NDUFA11Q86Y39 141 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 NECAP1Q8NC96 275 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 THAP6Q8TBB0 222 aa4.11□□□□□ -1.75
LRIT3-201ENST00000327908 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms