RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 LMO4P61968 165 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 LCN2P80188 198 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 KLRD1Q13241 179 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 RTL8BQ17RB0 113 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 OR4A16Q8NH70 328 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 MMP26Q9NRE1 261 aa14.92□□□□□ -0.02
USP39-201ENST00000323701 NUPL2O15504 423 aaKnown RBP14.91□□□□□ -0.02
USP39-201ENST00000323701 FGF16O43320 207 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 APOC3P02656 99 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 RBP4P02753 201 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 IL6RP08887 468 aaPredicted RBP14.91□□□□□ -0.02
USP39-201ENST00000323701 PAX6P26367 422 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 BAXQ07812 192 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 TGIF2LXQ8IUE1 241 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 CLDND2Q8NHS1 167 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 GINS3Q9BRX5 216 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 A0A1W2PPH5 198 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 FAM90A9PA6NNJ1 464 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 BUB1B-PAK6H3BSN5 160 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 IFNA17P01571 189 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 COL8A1P27658 744 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 ARHGDIBP52566 201 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 TAS2R30P59541 319 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 POU2AF1Q16633 256 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 SP5Q6BEB4 398 aaPredicted RBP14.91□□□□□ -0.02
USP39-201ENST00000323701 HCP5Q6MZN7 132 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 TMEM14EPQ6UXP3 125 aa14.91□□□□□ -0.02
USP39-201ENST00000323701 CEBPZOSA8MTT3 80 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 GOSR1O95249 250 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
USP39-201ENST00000323701 PAX2Q02962 417 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 STX12Q86Y82 276 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 PLXNB1O43157 2135 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 C15orf61A6NNL5 157 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 RUNX1Q01196 453 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 FAM71F2Q6NXP2 309 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 TMEM14BQ9NUH8 114 aa14.9□□□□□ -0.02
USP39-201ENST00000323701 BORCS7-ASMTA0A0B4J1R7 106 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 PMS2P5A8MQ11 134 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 MED6O75586 246 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 HRASP01112 189 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 OPN1MWP04001 364 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 OPN1MW2P0DN77 364 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 OPN1MW3P0DN78 364 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 SPP1P10451 314 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 OR8G2PQ6IF36 304 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 BEND2Q8NDZ0 799 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 TNFRSF14Q92956 283 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 MARC2Q969Z3 335 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 HARBI1Q96MB7 349 aa14.89□□□□□ -0.03
USP39-201ENST00000323701 HELZ2Q9BYK8 2649 aaKnown RBP14.89□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PRD5 423 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PRF3 423 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PRM7 423 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 APOA2P02652 100 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 FHITP49789 147 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 PRRX1P54821 245 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 TMEM177Q53S58 311 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 DHRS7BQ6IAN0 325 aaPredicted RBP14.88□□□□□ -0.03
USP39-201ENST00000323701 ZNF429Q86V71 674 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 LINC00518Q8N0U6 118 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 LHX4Q969G2 390 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 TCF19Q9Y242 345 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 ANKRD17O75179 2603 aaKnown RBP14.88□□□□□ -0.03
USP39-201ENST00000323701 LY6LH3BQJ8 138 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 IGLV2-23P01705 113 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 ATP6V0CP27449 155 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 VDAC2P45880 294 aaPredicted RBP14.88□□□□□ -0.03
USP39-201ENST00000323701 SPCS3P61009 180 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 EIF5AP63241 154 aaKnown RBP14.88□□□□□ -0.03
USP39-201ENST00000323701 RNF141Q8WVD5 230 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 FLYWCH2Q96CP2 140 aaKnown RBP14.88□□□□□ -0.03
USP39-201ENST00000323701 ATP5SQ99766 215 aa14.88□□□□□ -0.03
USP39-201ENST00000323701 C15orf62A8K5M9 175 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 AKR1C1Q04828 323 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 PDLIM3Q53GG5 364 aaPredicted RBP14.87□□□□□ -0.03
USP39-201ENST00000323701 PUSL1Q8N0Z8 303 aaKnown RBP14.87□□□□□ -0.03
USP39-201ENST00000323701 FOXA2Q9Y261 457 aaPredicted RBP14.87□□□□□ -0.03
USP39-201ENST00000323701 hCG_1809904A0A1W2PP81 198 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PPE2 198 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PR64 198 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PRV1 198 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 ZNF705EA8MWA4 302 aaPredicted RBP14.87□□□□□ -0.03
USP39-201ENST00000323701 M0R1W7 72 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 UPK2O00526 184 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 LHFPL4Q7Z7J7 247 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 OSR1Q8TAX0 266 aaPredicted RBP14.87□□□□□ -0.03
USP39-201ENST00000323701 TPSG1Q9NRR2 321 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 WASHC3Q9Y3C0 194 aa14.87□□□□□ -0.03
USP39-201ENST00000323701 APCP25054 2843 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 IGHV1-3A0A0C4DH29 117 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 ARG1P05089 322 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 PRTN3P24158 256 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 CNTFRP26992 372 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 SULT1A2P50226 295 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 SRSF3P84103 164 aaKnown RBP14.86□□□□□ -0.03
USP39-201ENST00000323701 DEFA5Q01523 94 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 ZNF266Q14584 549 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 VMO1Q7Z5L0 202 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms