RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF735P0CB33 412 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 MYOD1P15172 320 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 GNRHRP30968 328 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 POU2AF1Q16633 256 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 KLK9Q2XQG4 91 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 TMEM69Q5SWH9 247 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 MZT2AQ6P582 158 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 LYSMD2Q8IV50 215 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 CMTM3Q96MX0 182 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 PHB2Q99623 299 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 SPIN2AQ99865 258 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 SPIN2BQ9BPZ2 258 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 SLC5A7Q9GZV3 580 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 NAA50Q9GZZ1 169 aaKnown RBP15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 KLK9Q9UKQ9 250 aa15.14■□□□□ 0.01
PDZRN3-202ENST00000308537 CREBL2O60519 120 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 ZP3P21754 424 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 RFX2P48378 723 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 ALDH3B2P48448 385 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 FXYD4P59646 89 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 RHOGP84095 191 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 CTF1Q16619 201 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 GPX8Q8TED1 209 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 BET1LQ9NYM9 111 aa15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 PEF1Q9UBV8 284 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-202ENST00000308537 DNAH7Q8WXX0 4024 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 SULT1C2O00338 296 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 GP9P14770 177 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 KIR2DS2P43631 304 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 OR4A47Q6IF82 309 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 SSX9Q7RTT3 188 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 SPAG16Q8N0X2 631 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 VSTM2AQ8TAG5 236 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 MOB3AQ96BX8 217 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 FANCD2OSQ96PS1 177 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 FXYD6Q9H0Q3 95 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 NBEAL2Q6ZNJ1 2754 aa15.12■□□□□ 0.01
PDZRN3-202ENST00000308537 TRAV3A0A0B4J244 114 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 FAM223BA6NKX1 122 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 NPIPB5A8MRT5 1133 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 BMPR1BO00238 502 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 NOL3O60936 208 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 APOA1P02647 267 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 CRYGCP07315 174 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 MAS1LP35410 378 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 RPL5P46777 297 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 TMEM17Q86X19 198 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 FAM223AQ8IWN6 122 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 OR9G4Q8NGQ1 327 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 OR6Q1Q8NGQ2 317 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 SLC2A9Q9NRM0 540 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 EHFQ9NZC4 300 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 COMMD3Q9UBI1 195 aa15.11■□□□□ 0.01
PDZRN3-202ENST00000308537 ACTL6BO94805 426 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 HRASP01112 189 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 PMP2P02689 132 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 AREGP15514 252 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 ELK1P19419 428 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 PRSS3P35030 304 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 RPL27AP46776 148 aaKnown RBP15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 SYNJ2BPP57105 145 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 RPL8P62917 257 aaKnown RBP15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 ADAMTSL5Q6ZMM2 481 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 Q8N1Y9 231 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 RAB2BQ8WUD1 216 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 OR4C12Q96R67 309 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 BCL7BQ9BQE9 202 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 THAP7Q9BT49 309 aaPredicted RBP15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 IFT46Q9NQC8 304 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 ZNF257Q9Y2Q1 563 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 SMAD5-AS1Q9Y6J3 95 aa15.1■□□□□ 0.01
PDZRN3-202ENST00000308537 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 MPPED1O15442 326 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 LY86O95711 162 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 HPRT1P00492 218 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 CSN3P07498 182 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 NHLRC4P0CG21 123 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 ZNF182P17025 639 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 CTRB1P17538 263 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 MECP2P51608 486 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 TAS2R31P59538 309 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 EXOSC2Q13868 293 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 CTRB2Q6GPI1 263 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 NECAP1Q8NC96 275 aa15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 ZNF2Q9BSG1 426 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-202ENST00000308537 HPGDSO60760 199 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 OR2J3O76001 311 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 S1PR2O95136 353 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 HLA-GP17693 338 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 OR2B8PP59922 312 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 CATR1Q13166 79 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 CLVS1Q8IUQ0 354 aaPredicted RBP15.08■□□□□ 0
PDZRN3-202ENST00000308537 OR51H1Q8NH63 302 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 ASCL2Q99929 193 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 PLEKHA2Q9HB19 425 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 SIGLEC8Q9NYZ4 499 aa15.08■□□□□ 0
PDZRN3-202ENST00000308537 IGLC7A0M8Q6 106 aa15.07■□□□□ 0
PDZRN3-202ENST00000308537 UPK2O00526 184 aa15.07■□□□□ 0
PDZRN3-202ENST00000308537 PGLYRP1O75594 196 aaPredicted RBP15.07■□□□□ 0
PDZRN3-202ENST00000308537 PSMB6P28072 239 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms