RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 VWA1Q6PCB0 445 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 CISD2Q8N5K1 135 aaKnown RBP13.77□□□□□ -0.21
SSH3-201ENST00000308127 ZNRF1Q8ND25 227 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 SFRP2Q96HF1 295 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 MS4A10Q96PG2 267 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 PXMP4Q9Y6I8 212 aa13.77□□□□□ -0.21
SSH3-201ENST00000308127 PCNX2A6NKB5 2137 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 YLPM1P49750 1951 aaKnown RBP13.76□□□□□ -0.21
SSH3-201ENST00000308127 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 OR4A16Q8NH70 328 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 ZDHHC11Q9H8X9 412 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 WDR83OSQ9Y284 106 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 POLEQ07864 2286 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 A6NNC1 897 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 GCGP01275 180 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 KITLGP21583 273 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 ZNF134P52741 427 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 LRRC29Q8WV35 223 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 DUSP13Q9UII6 198 aa13.76□□□□□ -0.21
SSH3-201ENST00000308127 KLRC4-KLRK1H3BQV0 150 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 PAX1P15863 534 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 ACP1P24666 158 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
SSH3-201ENST00000308127 ZNF705AQ6ZN79 300 aaPredicted RBP13.75□□□□□ -0.21
SSH3-201ENST00000308127 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 C2orf88Q9BSF0 95 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 SPRY4Q9C004 299 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 ELOVL5Q9NYP7 299 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 IQCF6A8MYZ5 107 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 GATA2P23769 480 aaPredicted RBP13.75□□□□□ -0.21
SSH3-201ENST00000308127 PDLIM4P50479 330 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 BATFQ16520 125 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 CIB3Q96Q77 187 aaPredicted RBP13.75□□□□□ -0.21
SSH3-201ENST00000308127 TAAR6Q96RI8 345 aa13.75□□□□□ -0.21
SSH3-201ENST00000308127 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
SSH3-201ENST00000308127 CDKN1AP38936 164 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 IQCJQ1A5X6 159 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 SLC35E4Q6ICL7 350 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 TOMM20LQ6UXN7 152 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 C1orf210Q8IVY1 113 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 NOL4LQ96MY1 436 aaPredicted RBP13.74□□□□□ -0.21
SSH3-201ENST00000308127 FAM103A1Q9BTL3 118 aaKnown RBP13.74□□□□□ -0.21
SSH3-201ENST00000308127 KLF13Q9Y2Y9 288 aaPredicted RBP13.74□□□□□ -0.21
SSH3-201ENST00000308127 LNP1A1A4G5 178 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 AHRRA9YTQ3 701 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 K7EN84 100 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 DUTP33316 252 aaKnown RBP13.74□□□□□ -0.21
SSH3-201ENST00000308127 TIMP3P35625 211 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 ZNF90Q03938 601 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 KIAA1644Q3SXP7 199 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 VHLLQ6RSH7 139 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 GGTLC1Q9BX51 225 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 ZNRD1Q9P1U0 126 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 CSMD1Q96PZ7 3565 aa13.74□□□□□ -0.21
SSH3-201ENST00000308127 TCL1AP56279 114 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 RPL31P62899 125 aaKnown RBP13.73□□□□□ -0.21
SSH3-201ENST00000308127 DUX4L9Q6RFH8 374 aaPredicted RBP13.73□□□□□ -0.21
SSH3-201ENST00000308127 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
SSH3-201ENST00000308127 HES4Q9HCC6 221 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 TP53TG3Q9ULZ0 132 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 PIEZO2Q9H5I5 2752 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 PLXNB1O43157 2135 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 TNFSF15O95150 251 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 VENTXO95231 258 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 IER3P46695 156 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 SOX8P57073 446 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 ZNF124Q15973 351 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 DNLZQ5SXM8 178 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 MDS2Q8NDY4 140 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 PAM16Q9Y3D7 125 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 FXYD3Q14802 87 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 GABRA6Q16445 453 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 VWC2Q2TAL6 325 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 TMEM164Q5U3C3 297 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 TMEM144Q7Z5S9 345 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
SSH3-201ENST00000308127 PTPRBP23467 1997 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 SPINT2O43291 252 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 PDE6DO43924 150 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 TYMSP04818 313 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 CD46P15529 392 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 ZBTB34Q8NCN2 500 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 SERF1AO75920 110 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 CGAP01215 116 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 CECR9P0C854 216 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
SSH3-201ENST00000308127 Q6ZWC4 215 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 FAM216AQ8WUB2 273 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 TMEM140Q9NV12 185 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 TP53TG5Q9Y2B4 290 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 RNF114Q9Y508 228 aa13.72□□□□□ -0.21
SSH3-201ENST00000308127 NAV3Q8IVL0 2385 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms