RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 MFSD4AQ8N468 514 aa13.17□□□□□ -0.3
TFF3-201ENST00000291525 FYTTD1Q96QD9 318 aaKnown RBP13.17□□□□□ -0.3
TFF3-201ENST00000291525 TAS2R8Q9NYW2 309 aa13.17□□□□□ -0.3
TFF3-201ENST00000291525 A0A0A6YYH2 397 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 HMX3A6NHT5 357 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 A6NJ64 397 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 SSX5O60225 188 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 TPPPO94811 219 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 SDC2P34741 201 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 MECP2P51608 486 aaKnown RBP13.16□□□□□ -0.3
TFF3-201ENST00000291525 CD81P60033 236 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 EIF4EBP1Q13541 118 aaPredicted RBP13.16□□□□□ -0.3
TFF3-201ENST00000291525 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 EDA2RQ9HAV5 297 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 SLC2A9Q9NRM0 540 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 FBXL7Q9UJT9 491 aa13.16□□□□□ -0.3
TFF3-201ENST00000291525 DNAH7Q8WXX0 4024 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 TEX22C9J3V5 150 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 ZNF735P0CB33 412 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 HIST1H1BP16401 226 aaKnown RBP13.15□□□□□ -0.3
TFF3-201ENST00000291525 RPL8P62917 257 aaKnown RBP13.15□□□□□ -0.3
TFF3-201ENST00000291525 MXD1Q05195 221 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 CATR1Q13166 79 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
TFF3-201ENST00000291525 ZFAND6Q6FIF0 208 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 SECTM1Q8WVN6 248 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
TFF3-201ENST00000291525 TECRQ9NZ01 308 aaKnown RBP13.15□□□□□ -0.3
TFF3-201ENST00000291525 TRAV18A0A075B6X5 111 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 PPP5D1E7EU14 171 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 LGALS9O00182 355 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 TMEM127O75204 238 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 IL6RP08887 468 aaPredicted RBP13.14□□□□□ -0.31
TFF3-201ENST00000291525 FCGR2CP31995 323 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 IDNKQ5T6J7 187 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 HOGA1Q86XE5 327 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 OR13F1Q8NGS4 319 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 EEF1AKMT3Q96AZ1 226 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 NEURL2Q9BR09 285 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 PLEKHA3Q9HB20 300 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 CEPT1Q9Y6K0 416 aa13.14□□□□□ -0.31
TFF3-201ENST00000291525 LOC100506127A0A0U1RQW1 187 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 PPYP01298 95 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 CRYGCP07315 174 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 DEFA4P12838 97 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 HLA-GP17693 338 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 PSMB6P28072 239 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 ARL3P36405 182 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 CBX5P45973 191 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 FAM106AQ4KMX7 169 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 BORCS5Q969J3 196 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 SLC25A38Q96DW6 304 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 SLC5A7Q9GZV3 580 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 HRASLSQ9HDD0 168 aa13.13□□□□□ -0.31
TFF3-201ENST00000291525 LCE6AA0A183 80 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 RBFOX2O43251 390 aaKnown RBP eCLIP13.12□□□□□ -0.31
TFF3-201ENST00000291525 TNFSF12O43508 249 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 FOLR2P14207 255 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 TAS2R31P59538 309 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 TIMM50Q3ZCQ8 353 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 SPAG16Q8N0X2 631 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 OR5H6Q8NGV6 325 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 CCL28Q9NRJ3 127 aa13.12□□□□□ -0.31
TFF3-201ENST00000291525 TRBV7-1A0A0A6YYK4 115 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CYB5BO43169 146 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 OR2C1O95371 312 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 HPRT1P00492 218 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 AREGP15514 252 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CTRB1P17538 263 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 BRWD1-AS2P59051 145 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CTRB2Q6GPI1 263 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 OR4A47Q6IF82 309 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CLEC19AQ6UXS0 136 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 ADAMTSL5Q6ZMM2 481 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 SLC16A13Q7RTY0 426 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
TFF3-201ENST00000291525 ZNF785A8K8V0 405 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 E7EUB6 86 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 NDUFB8O95169 186 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
TFF3-201ENST00000291525 HLA-AP01891 365 aaKnown RBP13.1□□□□□ -0.31
TFF3-201ENST00000291525 NQO2P16083 231 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms