RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 VAMP3Q15836 100 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 TMEM191AQ9H0A3 160 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 PARD6AQ9NPB6 346 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 LINC00312Q9Y6C7 94 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 CACNA1AO00555 2505 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 A0A0G2JLM5 398 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 SNURFLB1AK76 121 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 LINC00271P0C7V0 271 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 TIMP3P35625 211 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 RTN4RL2Q86UN3 420 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 OR13A1Q8NGR1 328 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 WBP1Q96G27 269 aa15.68■□□□□ 0.1
PCDH1-201ENST00000287008 IGHV3-48P01763 117 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 CD74P04233 296 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 IER3P46695 156 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 SULT1A2P50226 295 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 TMEM97Q5BJF2 176 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.67■□□□□ 0.1
PCDH1-201ENST00000287008 TM2D1Q9BX74 207 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 HEATR1Q9H583 2144 aaKnown RBP15.67■□□□□ 0.1
PCDH1-201ENST00000287008 A0A1B0GTI1 187 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 J3QR89 54 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 TSPOP30536 169 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 MEF2BQ02080 365 aaPredicted RBP15.67■□□□□ 0.1
PCDH1-201ENST00000287008 RTN4RQ9BZR6 473 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 LAIR2Q6ISS4 152 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 SYT8Q8NBV8 401 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 OR4X2Q8NGF9 303 aa15.67■□□□□ 0.1
PCDH1-201ENST00000287008 RALGAPA2Q2PPJ7 1873 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 H0YL77 283 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 NDUFB4O95168 129 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 IGKV1D-33P01593 117 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 IGKV1-33P01594 117 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 IL4P05112 153 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 KLK2P20151 261 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 SGMS2Q8NHU3 365 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 SNRPD3P62318 126 aaKnown RBP15.66■□□□□ 0.1
PCDH1-201ENST00000287008 DUX5Q96PT3 197 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 C1QL1O75973 258 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 LRP11Q86VZ4 500 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 ZCCHC24Q8N2G6 241 aaKnown RBP15.66■□□□□ 0.1
PCDH1-201ENST00000287008 GATAD1Q8WUU5 269 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 RGP1Q92546 391 aaPredicted RBP15.66■□□□□ 0.1
PCDH1-201ENST00000287008 RAB24Q969Q5 203 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 ELOA3CA0A087WX78 387 aaPredicted RBP15.66■□□□□ 0.1
PCDH1-201ENST00000287008 ZIC4Q8N9L1 334 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 SMIM8Q96KF7 97 aa15.66■□□□□ 0.1
PCDH1-201ENST00000287008 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 LRRC37A2A6NM11 1700 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 DOCK10Q96BY6 2186 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 IL18BPO95998 194 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 ELOBQ15370 118 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 PEAR1Q5VY43 1037 aaPredicted RBP15.65■□□□□ 0.1
PCDH1-201ENST00000287008 C19orf24Q9BVV8 132 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 ANKRD36A6QL64 1941 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 TMEM187Q14656 261 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 SCGB1D4Q6XE38 83 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 CHD5Q8TDI0 1954 aa15.65■□□□□ 0.1
PCDH1-201ENST00000287008 NPIPB6E9PJ23 425 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 RPS11P62280 158 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDH1-201ENST00000287008 ANGPTL6Q8NI99 470 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 SNRPEP62304 92 aaKnown RBP15.64■□□□□ 0.09
PCDH1-201ENST00000287008 PSG9Q00887 426 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 C12orf57Q99622 126 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 IGHV3OR16-13A0A075B7E8 117 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 IGHV3-74A0A0B4J1X5 117 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 THBDP07204 575 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 CYB561D1Q8N8Q1 229 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 MYOZ3Q8TDC0 251 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 WDFY1Q8IWB7 410 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 OR51M1Q9H341 326 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 MPDZO75970 2070 aa15.64■□□□□ 0.09
PCDH1-201ENST00000287008 IGKV3D-15A0A087WSY6 115 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 IGKV3-15P01624 115 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 JMJD8Q96S16 334 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 NABP2Q9BQ15 211 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 ELOVL1Q9BW60 279 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 NPFFR1Q9GZQ6 430 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 CCL3L1P16619 93 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 FREM3P0C091 2139 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 RELBQ01201 579 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 FOXF2Q12947 444 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 TMEM183BQ1AE95 376 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 AQP10Q96PS8 301 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 FUT9Q9Y231 359 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 TP53RKQ96S44 253 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 MSRB2Q9Y3D2 182 aa15.63■□□□□ 0.09
PCDH1-201ENST00000287008 RNF224P0DH78 156 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 TWIST1Q15672 202 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 GSX1Q9H4S2 264 aaPredicted RBP15.62■□□□□ 0.09
PCDH1-201ENST00000287008 FBXL7Q9UJT9 491 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 PHLDA3Q9Y5J5 127 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 PQLC2LA1A4F0 135 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 FAM181BA6NEQ2 426 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 APCSP02743 223 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 GPX1P07203 203 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 DLX1P56177 255 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 CXCL2P19875 107 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 PPP1R27Q86WC6 154 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 MAP1LC3CQ9BXW4 147 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms