RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 COMPP49747 757 aaPredicted RBP13.29□□□□□ -0.28
USP43-201ENST00000285199 NUTF2P61970 127 aaKnown RBP13.29□□□□□ -0.28
USP43-201ENST00000285199 ZNF766Q5HY98 468 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 SOX8P57073 446 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 FAM201AQ5SY85 155 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 MOB3BQ86TA1 216 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 BCL2L2Q92843 193 aaPredicted RBP13.28□□□□□ -0.28
USP43-201ENST00000285199 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 PRDX2P32119 198 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 FBXW9Q5XUX1 488 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 HCP5Q6MZN7 132 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 OCC1Q8TAD7 63 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 TMEM106BQ9NUM4 274 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 TRBV24-1A0A075B6N3 115 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
USP43-201ENST00000285199 CCL1P22362 96 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 DMRTC2Q8IXT2 367 aaPredicted RBP13.28□□□□□ -0.28
USP43-201ENST00000285199 NEU1Q99519 415 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
USP43-201ENST00000285199 FAM157AC9JC47 383 aa13.27□□□□□ -0.28
USP43-201ENST00000285199 SSPNQ14714 243 aa13.27□□□□□ -0.28
USP43-201ENST00000285199 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.28
USP43-201ENST00000285199 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.28
USP43-201ENST00000285199 MED13Q9UHV7 2174 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 NKX6-3A6NJ46 265 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 SP1P08047 785 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 TEX38Q6PEX7 206 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 LSM10Q969L4 123 aaKnown RBP13.27□□□□□ -0.29
USP43-201ENST00000285199 HARBI1Q96MB7 349 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.29
USP43-201ENST00000285199 TTTY12Q9BZ98 90 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 TCF19Q9Y242 345 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.29
USP43-201ENST00000285199 K7EQM0 130 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 P01737 135 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 COX6A1P12074 109 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 GZMHP20718 246 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 HOXA4Q00056 320 aaPredicted RBP13.27□□□□□ -0.29
USP43-201ENST00000285199 LHFPL4Q7Z7J7 247 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 ZIC4Q8N9L1 334 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 ARFGEF3Q5TH69 2177 aa13.27□□□□□ -0.29
USP43-201ENST00000285199 GCHFRP30047 84 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 LEMD1Q68G75 181 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 SMIM15Q7Z3B0 74 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 MS4A5Q9H3V2 200 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 MKI67P46013 3256 aaKnown RBP13.26□□□□□ -0.29
USP43-201ENST00000285199 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 REG1AP05451 166 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 CELA3BP08861 270 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 LINC00869P0C866 280 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 FAM53AQ6NSI3 398 aaPredicted RBP13.26□□□□□ -0.29
USP43-201ENST00000285199 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 OR8G5Q8NG78 346 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 OR5R1Q8NH85 324 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 OR51B2Q9Y5P1 312 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 TRAV24A0A0B4J272 114 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 PRR19A6NJB7 356 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 CYC1P08574 325 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 LYL1P12980 280 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 UCP2P55851 309 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 RELBQ01201 579 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 TDHQ8IZJ6 230 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 PGLYRP4Q96LB8 373 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
USP43-201ENST00000285199 MUC21A0A0G2JKD1 596 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 MUC21A0A140T8X8 626 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 LILRA1O75019 489 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 DEFB109BQ30KR1 87 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 MUC21Q5SSG8 566 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 ATP1A1-AS1Q5TC04 95 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 NRN1Q9NPD7 142 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 COX7A1P24310 79 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 CCL8P80075 99 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 NMSQ5H8A3 153 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 C20orf204Q6ZNR8 217 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 LRTM2Q8N967 370 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
USP43-201ENST00000285199 SNHG12Q9BXW3 62 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 IGFBP2P18065 325 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 RIPPLY2Q5TAB7 128 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 NABP1Q96AH0 204 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
USP43-201ENST00000285199 PRDM14Q9GZV8 571 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
USP43-201ENST00000285199 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms