RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CACNG5Q9UF02 275 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 CELSR1Q9NYQ6 3014 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 DEDDO75618 318 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 MOSP00540 346 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 SNRNP70P08621 437 aaKnown RBP15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 CD24P25063 80 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 ID3Q02535 119 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 EBI3Q14213 229 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 CXorf66Q5JRM2 361 aaPredicted RBP15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 FAM120AOSQ5T036 256 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 C9orf139Q6ZV77 190 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 FOXRED2Q8IWF2 684 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 COA4Q9NYJ1 87 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 POMT1Q9Y6A1 747 aa15.17■□□□□ 0.02
PDLIM3-202ENST00000284770 ST8SIA3O43173 380 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 SNAPC5O75971 98 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 IGLV2-23P01705 113 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 NKX2-1P43699 371 aaPredicted RBP15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 DYNLT3P51808 116 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 OR4A47Q6IF82 309 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 THNSL2Q86YJ6 484 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 OR2T10Q8NGZ9 312 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 EAF1Q96JC9 268 aaPredicted RBP15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 TMUB1Q9BVT8 246 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 ZFP57Q9NU63 452 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 TMEM140Q9NV12 185 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 RCL1Q9Y2P8 373 aaKnown RBP15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 LSM5Q9Y4Y9 91 aaKnown RBP15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 RNF222A6NCQ9 220 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 FAM106CPP0CH98 169 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 HES1Q14469 280 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 DCUN1D4Q92564 292 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 MFFQ9GZY8 342 aa15.16■□□□□ 0.02
PDLIM3-202ENST00000284770 IL6RP08887 468 aaPredicted RBP15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 SAA1P0DJI8 122 aaPredicted RBP15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 CD99P14209 185 aa15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 FOSL1P15407 271 aa15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 BCL6BQ8N143 479 aaPredicted RBP15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 TSNAXQ99598 290 aaKnown RBP15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 C11orf1Q9H5F2 150 aa15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 ACANP16112 2415 aa15.15■□□□□ 0.02
PDLIM3-202ENST00000284770 L7N2F9 121 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 KCNAB3O43448 404 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 RLN2P04090 185 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 UBE2KP61086 200 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 HNF4GQ14541 408 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 ZNF345Q14585 488 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 TET2Q6N021 2002 aaPredicted RBP15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 PUSL1Q8N0Z8 303 aaKnown RBP15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 VSTM2AQ8TAG5 236 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 SMR3AQ99954 134 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 BET1LQ9NYM9 111 aa15.14■□□□□ 0.01
PDLIM3-202ENST00000284770 OR9G9P0C7N8 305 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 CNTFRP26992 372 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 POLR2GP62487 172 aaKnown RBP eCLIP15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 IFITM2Q01629 132 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 AANATQ16613 207 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 VMA21Q3ZAQ7 101 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 FBLN7Q53RD9 439 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 ACOT7LQ6ZUV0 252 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 Q8N6K4 173 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 C22orf15Q8WYQ4 148 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 SSX3Q99909 188 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 TMEM160Q9NX00 188 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 OR2F2O95006 317 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 LY6G6DO95868 133 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 RELBQ01201 579 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 OR2F1Q13607 317 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 PSG5Q15238 335 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 LRRC75BQ2VPJ9 315 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 DEFB112Q30KQ8 113 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 TEX45Q8NA69 505 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 PIFOQ8TCI5 191 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 MAGT1Q9H0U3 335 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 TNCP24821 2201 aa15.13■□□□□ 0.01
PDLIM3-202ENST00000284770 TRAV3A0A0B4J244 114 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 MSGN1A6NI15 193 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 E5RGE8 158 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 SLC25A17O43808 307 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 KBTBD11O94819 623 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 NXPH3O95157 252 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 TMEM11P17152 192 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 S100A11P31949 105 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 F2RL1P55085 397 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 MMDQ15546 238 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 IL17RELQ6ZVW7 336 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 KCNRGQ8N5I3 272 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 INO80EQ8NBZ0 244 aaPredicted RBP15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 NPBQ8NG41 125 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 OR4A16Q8NH70 328 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 OR4A5Q8NH83 315 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 AQP10Q96PS8 301 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 NSG2Q9Y328 171 aa15.12■□□□□ 0.01
PDLIM3-202ENST00000284770 A0A0D9SG52 128 aa15.11■□□□□ 0.01
PDLIM3-202ENST00000284770 FAM90A26D6RGX4 464 aa15.11■□□□□ 0.01
PDLIM3-202ENST00000284770 UPK2O00526 184 aa15.11■□□□□ 0.01
PDLIM3-202ENST00000284770 RBMXL2O75526 392 aaKnown RBP15.11■□□□□ 0.01
PDLIM3-202ENST00000284770 SPDEFO95238 335 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms