RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZADH2Q8N4Q0 377 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 NEIL1Q96FI4 390 aaPredicted RBP13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 BTF3L4Q96K17 158 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SAMD10Q9BYL1 202 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZDHHC11Q9H8X9 412 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TRAV17A0A0B4J275 112 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PGPEP1LA6NFU8 196 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 F2Z2F3 143 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 HYPMO75409 117 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TOMM40O96008 361 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 WNT2P09544 360 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 HNRNPA3P51991 378 aaKnown RBP13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SMIM15Q7Z3B0 74 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 LINC01551Q86U37 167 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZNF738Q8NE65 137 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SYNGR1O43759 233 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 VENTXO95231 258 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CRYAAP02489 173 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 C1QTNF9P0C862 333 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CTRLP40313 264 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SUMO1P63165 101 aaKnown RBP13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PLP2Q04941 152 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 NRN1LQ496H8 165 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 RPRMLQ8N4K4 120 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 RBMXL3Q8N7X1 1067 aaKnown RBP13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 NUDT10Q8NFP7 164 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 APOBEC3DQ96AK3 386 aaPredicted RBP13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 FBXL7Q9UJT9 491 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 OR2W1Q9Y3N9 320 aa13.35□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SH2D1BO14796 132 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PPBPP02775 128 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 ZNF324BQ6AW86 544 aaPredicted RBP13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IGFL2Q6UWQ7 119 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 IL1F10Q8WWZ1 152 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MTCH1Q9NZJ7 389 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 PPP1R3CQ9UQK1 317 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CADP27708 2225 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 C11orf94C9JXX5 98 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 MLNRO43193 412 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CELA3BP08861 270 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 CTXN2P0C2S0 81 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 FBLN7Q53RD9 439 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
MAP1LC3B-201ENST00000268607 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 SRSF7Q16629 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 MDP1Q86V88 176 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 SAXO1Q8IYX7 474 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 ELOVL5Q9NYP7 299 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 LRBAP50851 2863 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CEACAM4O75871 244 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CLDN1O95832 211 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CRISP2P16562 243 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CBLN1P23435 193 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 BAGE3Q86Y29 109 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 C1orf174Q8IYL3 243 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 ZNF114Q8NC26 417 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 LSM10Q969L4 123 aaKnown RBP13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 STARD4Q96DR4 205 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 NCOR1P1Q9H4R4 102 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 SH3BGRL2Q9UJC5 107 aa13.33□□□□□ -0.28
MAP1LC3B-201ENST00000268607 HS3ST1O14792 307 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 ARR3P36575 388 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 UBE2G2P60604 165 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 PRR30Q53SZ7 412 aaPredicted RBP13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 Q8N976 141 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 IGHV2OR16-5A0A0B4J2B6 119 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 IGHV2-70DA0A0C4DH43 119 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CA6P23280 308 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FGF12P61328 243 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 GNB1P62873 340 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 CEACAM21Q3KPI0 293 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 ERASQ7Z444 233 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 OR5P3Q8WZ94 311 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 RNF2Q99496 336 aa13.32□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A18PA6NE21 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A16PA6NEW6 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A20PA6NIJ5 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A22PA8MWA6 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A12PA8MX19 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A5PA8MXJ8 464 aa13.31□□□□□ -0.28
MAP1LC3B-201ENST00000268607 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms