RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PLAUP00749 431 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 IFNA1P01562 189 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CT45A6P0DMU7 189 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CT45A5P0DMU8 189 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CT45A7P0DMV0 189 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 BCL2P10415 239 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 MDKP21741 143 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CD1BP29016 333 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 AKR1C3P42330 323 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CEBPGP53567 150 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 RAB11AP62491 216 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ACSM6Q6P461 480 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 C15orf54Q8N8G6 183 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 OR10G4Q8NGN3 311 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ENY2Q9NPA8 101 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 SLC35D1Q9NTN3 355 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ZFP92A6NM28 416 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 PAX6P26367 422 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 OR10G9Q8NGN4 311 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 OR10G7Q8NGN6 311 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 LHX4Q969G2 390 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 GGACTQ9BVM4 153 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 PRNDQ9UKY0 176 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 ARFGEF3Q5TH69 2177 aa10.59□□□□□ -0.71
SPTLC1-201ENST00000262554 POLEQ07864 2286 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 CTXND1A0A1B0GTU2 59 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 RRHO14718 337 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 MPDU1O75352 247 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 APOA2P02652 100 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 FBP1P09467 338 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 MUC15Q8N387 334 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 ZNRD1Q9P1U0 126 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 MLXQ9UH92 298 aa10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 TLN1Q9Y490 2541 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-201ENST00000262554 SMCO3A2RU48 225 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 H3BQ15 152 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 SOX15O60248 233 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 IGKV1D-33P01593 117 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 IGKV1-33P01594 117 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 IFNA4P05014 189 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 LOXP28300 417 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 FLI1Q01543 452 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 FAM122CQ6P4D5 195 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 RBMS3Q6XE24 437 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 ABHD12Q8N2K0 398 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 P2RX4Q99571 388 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 TUBA4BQ9H853 241 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 VAX2Q9UIW0 290 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 OR51B2Q9Y5P1 312 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 NBEAQ8NFP9 2946 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 ROS1P08922 2347 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 COLCA2A8K830 154 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 DLK1P80370 383 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 ADORA2A-AS1P86434 159 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 AVPI1Q5T686 147 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 C8orf31Q8N9H6 132 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 SLC24A4Q8NFF2 622 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 OR10X1Q8NGY0 326 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 OSR1Q8TAX0 266 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 SLC25A22Q9H936 323 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 ZNF257Q9Y2Q1 563 aa10.57□□□□□ -0.72
SPTLC1-201ENST00000262554 UPK2O00526 184 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 CYB5BO43169 146 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 IGKV1-16P04430 117 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 NPY1RP25929 384 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 ZNF672Q499Z4 452 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 FAM71F2Q6NXP2 309 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 LINC00311Q8N616 119 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 MRPL20Q9BYC9 149 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 FKBP11Q9NYL4 201 aa10.56□□□□□ -0.72
SPTLC1-201ENST00000262554 PRSS46E5RG02 174 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 J3QR06 171 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 SIAH2O43255 324 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 KBTBD11O94819 623 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 ZNF596Q8TC21 504 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TMEM186Q96B77 213 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TVP23CQ96ET8 276 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 HINT2Q9BX68 163 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms