RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 FOXI3A8MTJ6 420 aaPredicted RBP9.84□□□□□ -0.83
LAMA4-201ENST00000230538 MOSP00540 346 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 IGKV3-20P01619 116 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 IL4P05112 153 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 CRYBA2P53672 197 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 FAM159AQ6UWV7 190 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 POLR2AP24928 1970 aaKnown RBP9.84□□□□□ -0.83
LAMA4-201ENST00000230538 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 UCP3P55916 312 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 HIST1H1AQ02539 215 aaPredicted RBP9.84□□□□□ -0.83
LAMA4-201ENST00000230538 RSPO4Q2I0M5 234 aaPredicted RBP9.84□□□□□ -0.83
LAMA4-201ENST00000230538 ASPHD2Q6ICH7 369 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 B9A039 149 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 GCHFRP30047 84 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 PF4P02776 101 aa9.84□□□□□ -0.83
LAMA4-201ENST00000230538 A0A1W2PQM1 296 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 SOD3P08294 240 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 POC1AQ8NBT0 407 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 APCDD1LQ8NCL9 501 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 FOXJ2Q9P0K8 574 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 FOXH1O75593 365 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3-23P01764 117 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 CYP2G1PQ6ZSU1 146 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 RECKO95980 971 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 ACSF3Q4G176 576 aaPredicted RBP9.83□□□□□ -0.84
LAMA4-201ENST00000230538 RPL39P5Q59GN2 51 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 DNASE2BQ8WZ79 361 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 CTHRC1Q96CG8 243 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 PTPRFP10586 1907 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 EPOPA6NHQ4 379 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 FHITP49789 147 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 C10orf128Q5T292 105 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 LAIR2Q6ISS4 152 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 LINC01560Q8TB33 94 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 LOC390937A0A1W2PQ73 354 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3-35A0A0C4DH35 117 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 SCARF2Q96GP6 870 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 NHLRC3Q5JS37 347 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 ZNRF1Q8ND25 227 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 SSBP3Q9BWW4 388 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 SCN4AP35499 1836 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 BIVMQ86UB2 503 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 PMCHL2Q9BQD1 86 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 PARD6GQ9BYG4 376 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 ARID2Q68CP9 1835 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 RRHO14718 337 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 KLF4O43474 513 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 HBBP68871 147 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 LCN2P80188 198 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 LINC01590Q5TEZ4 76 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 TRGV3P03979 118 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 APOBEC3AP31941 199 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 C1QTNF12Q5T7M4 302 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 Q6ZT83 130 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 ZNF236Q9UL36 1845 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 IGLV3-21P80748 117 aaPredicted RBP9.82□□□□□ -0.84
LAMA4-201ENST00000230538 C19orf48Q6RUI8 117 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 LINC00470Q9BZP3 86 aa9.82□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3-66A0A0C4DH42 116 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 EGR4Q05215 589 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 C2orf68Q2NKX9 166 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 OR13C6PQ8NH95 151 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 F5P12259 2224 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 SMAD7O15105 426 aaKnown RBP9.81□□□□□ -0.84
LAMA4-201ENST00000230538 TIAF1O95411 115 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 EMP1P54849 157 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
LAMA4-201ENST00000230538 KLRB1Q12918 225 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM74BQ9NUR3 256 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 BEX4Q9NWD9 120 aaPredicted RBP9.81□□□□□ -0.84
LAMA4-201ENST00000230538 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 C9JCJ5 164 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 ACP7Q6ZNF0 438 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 FAM181AQ8N9Y4 354 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 CLDND2Q8NHS1 167 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 CEACAM4O75871 244 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 ICAM4Q14773 271 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 FAM209BQ5JX69 171 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 PAPPA-AS1Q5QFB9 102 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 KNL1Q8NG31 2342 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 J3QW42 95 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 GFRA3O60609 400 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 FDCSPQ8NFU4 85 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 SPSB2Q99619 263 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 TMEM160Q9NX00 188 aa9.81□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 DDTP30046 118 aa9.8□□□□□ -0.84
LAMA4-201ENST00000230538 ATP5IP56385 69 aaPredicted RBP9.8□□□□□ -0.84
LAMA4-201ENST00000230538 ZXDCQ2QGD7 858 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms