RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 FCER2P06734 321 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 MYOD1P15172 320 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
GATC-201ENST00000229384 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
GATC-201ENST00000229384 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 NECAP1Q8NC96 275 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 SECTM1Q8WVN6 248 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 FANCD2OSQ96PS1 177 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 ANAPC10Q9UM13 185 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 ZNF257Q9Y2Q1 563 aa11.31□□□□□ -0.6
GATC-201ENST00000229384 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 TNFSF12O43508 249 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 OR2J3O76001 311 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 ACTL6BO94805 426 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 CRYGCP07315 174 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 MAS1LP35410 378 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 RPL27AP46776 148 aaKnown RBP11.3□□□□□ -0.6
GATC-201ENST00000229384 ARPC4P59998 168 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
GATC-201ENST00000229384 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 AREGP15514 252 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 EDN2P20800 178 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 POU2AF1Q16633 256 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 C15orf32Q32M92 178 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 ZNF818PQ6ZRF7 136 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 SLC5A7Q9GZV3 580 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
GATC-201ENST00000229384 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 PPP5D1E7EU14 171 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 H0Y980 276 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 SULT1C2O00338 296 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.66e-11■■■■■ 29.8
GATC-201ENST00000229384 AIREO43918 545 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 NDUFB8O95169 186 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 HRASP01112 189 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 CTRB1P17538 263 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 NAT1P18440 290 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 CBX5P45973 191 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 TIMM50Q3ZCQ8 353 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 CTRB2Q6GPI1 263 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 SLC25A42Q86VD7 318 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 SPAG16Q8N0X2 631 aa11.28□□□□□ -0.6
GATC-201ENST00000229384 FYTTD1Q96QD9 318 aaKnown RBP11.28□□□□□ -0.6
GATC-201ENST00000229384 NBEAL2Q6ZNJ1 2754 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 HLA-GP17693 338 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 PSMB6P28072 239 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 GNRHRP30968 328 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 FXYD4P59646 89 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
GATC-201ENST00000229384 TATDN3Q17R31 274 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 UBE2NLQ5JXB2 153 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 Q8N402 240 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 OR4A5Q8NH83 315 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 FBXL7Q9UJT9 491 aa11.27□□□□□ -0.61
GATC-201ENST00000229384 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 ZNF785A8K8V0 405 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 UPK2O00526 184 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 HPRT1P00492 218 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 HLA-AP01891 365 aaKnown RBP11.26□□□□□ -0.61
GATC-201ENST00000229384 RFX2P48378 723 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 TAS2R31P59538 309 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 TAS2R20P59543 309 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 OR2B8PP59922 312 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
GATC-201ENST00000229384 DEFB114Q30KQ6 69 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 LINC00322Q6ZN03 302 aaPredicted RBP11.26□□□□□ -0.61
GATC-201ENST00000229384 LYSMD2Q8IV50 215 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 TSPAN14Q8NG11 270 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
GATC-201ENST00000229384 S100A16Q96FQ6 103 aaKnown RBP11.26□□□□□ -0.61
GATC-201ENST00000229384 PEMTQ9UBM1 199 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 S4R3C0 116 aa11.26□□□□□ -0.61
GATC-201ENST00000229384 A0A087WXM4 84 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 IGLC7A0M8Q6 106 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 LGALS9O00182 355 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 OR2C1O95371 312 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 IGHV3-23P01764 117 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 REG1AP05451 166 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 HAGHQ16775 308 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 CD300EQ496F6 205 aaPredicted RBP11.25□□□□□ -0.61
GATC-201ENST00000229384 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
GATC-201ENST00000229384 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms