RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 OR10A7Q8NGE5 316 aa18.12■□□□□ 0.49
SMARCD2-201ENST00000225742 GATAD1Q8WUU5 269 aa18.12■□□□□ 0.49
SMARCD2-201ENST00000225742 GAFA1Q96PS6 74 aa18.12■□□□□ 0.49
SMARCD2-201ENST00000225742 SAA2-SAA4A0A096LPE2 208 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 RRHO14718 337 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 PPP1R2P9O14990 202 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 HRASP01112 189 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 TRGC1P0CF51 173 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 SAA2P0DJI9 122 aaPredicted RBP18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 CD40P25942 277 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 HSPE1P61604 102 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 ZNF788Q6ZQV5 615 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 SSX3Q99909 188 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 GSN-AS1Q9NRJ2 163 aa18.11■□□□□ 0.49
SMARCD2-201ENST00000225742 FNDC10F2Z333 226 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 PHOX2AO14813 284 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 GYPAP02724 150 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 TEX36Q5VZQ5 186 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 ABHD5Q8WTS1 349 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 FRZBQ92765 325 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 MS4A5Q9H3V2 200 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 NPVFQ9HCQ7 196 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 ENY2Q9NPA8 101 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 TMEM14BQ9NUH8 114 aa18.1■□□□□ 0.49
SMARCD2-201ENST00000225742 TRAV3A0A0B4J244 114 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 IRF2P14316 349 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 VKORC1L1Q8N0U8 176 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 RHOVQ96L33 236 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 MGST2Q99735 147 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 IFITM10A6NMD0 228 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 SRP14P37108 136 aaKnown RBP18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 GALR1P47211 349 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 OR4A47Q6IF82 309 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 SPNS3Q6ZMD2 512 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 C1orf229Q6ZS94 237 aaPredicted RBP18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 OR51G1Q8NGK1 321 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 GGTLC1Q9BX51 225 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 LSM4Q9Y4Z0 139 aaKnown RBP18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 PXMP4Q9Y6I8 212 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 DSCAML1Q8TD84 2053 aa18.09■□□□□ 0.49
SMARCD2-201ENST00000225742 TANC2Q9HCD6 1990 aa18.08■□□□□ 0.49
SMARCD2-201ENST00000225742 CXorf1O96002 111 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 SELLP14151 372 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 CD99P14209 185 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 ATP5IP56385 69 aaPredicted RBP18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 SSX8Q7RTT4 187 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 HIST3H2BBQ8N257 126 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 ZNF383Q8NA42 475 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 TMEM170AQ8WVE7 144 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 ELOVL5Q9NYP7 299 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 PRNDQ9UKY0 176 aa18.08■□□□□ 0.48
SMARCD2-201ENST00000225742 TMPRSS2O15393 492 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 STAG3L2P0CL84 134 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 STAG3L3P0CL85 134 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 NPY1RP25929 384 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 RAB31Q13636 194 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 FAM201AQ5SY85 155 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 LYG1Q8N1E2 194 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 ABHD12Q8N2K0 398 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 SLC24A4Q8NFF2 622 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 ZNF257Q9Y2Q1 563 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 TRAV38-1A0A0B4J264 116 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 IGHV3-7P01780 117 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 FAM27E3Q08E93 113 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 DNLZQ5SXM8 178 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 TCF23Q7RTU1 214 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 BTF3L4Q96K17 158 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 MIOXQ9UGB7 285 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 RPUSD1Q9UJJ7 312 aaKnown RBP18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 CACNA1HO95180 2353 aa18.07■□□□□ 0.48
SMARCD2-201ENST00000225742 hADV38S2A0JD32 116 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 NKX6-3A6NJ46 265 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 IL6RP08887 468 aaPredicted RBP18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 TNFRSF1AP19438 455 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 PLA2G5P39877 138 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 TMEM108Q6UXF1 575 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 SLC25A48Q6ZT89 311 aaKnown RBP18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 LEAP2Q969E1 77 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 CCL13Q99616 98 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 PITPNC1Q9UKF7 332 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 DSCAMO60469 2012 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 WDFY4Q6ZS81 3184 aa18.06■□□□□ 0.48
SMARCD2-201ENST00000225742 GCSAMLQ5JQS6 135 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 CHODLQ9H9P2 273 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 GGCTO75223 188 aaKnown RBP18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 NPPCP23582 126 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 MEF2CQ06413 473 aaPredicted RBP18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 RTL8BQ17RB0 113 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 MIC13Q5XKP0 118 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 TEPPQ6URK8 271 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 TMEM204Q9BSN7 226 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 OR51B2Q9Y5P1 312 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 LINC00312Q9Y6C7 94 aa18.05■□□□□ 0.48
SMARCD2-201ENST00000225742 TET2Q6N021 2002 aaPredicted RBP18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 ZNF318Q5VUA4 2279 aa18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 RPL29P47914 159 aaKnown RBP18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 FAM3BP58499 235 aaPredicted RBP18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 GNB1P62873 340 aa18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 UTF1Q5T230 341 aa18.04■□□□□ 0.48
SMARCD2-201ENST00000225742 KCNIP4Q6PIL6 250 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms