RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
MRPL28-201ENST00000199706 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
MRPL28-201ENST00000199706 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 I3L521 148 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 GSTZ1O43708 216 aaPredicted RBP13.54□□□□□ -0.24
MRPL28-201ENST00000199706 RAMP3O60896 148 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 PGLYRP1O75594 196 aaPredicted RBP13.54□□□□□ -0.24
MRPL28-201ENST00000199706 IFNA6P05013 189 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 NQO2P16083 231 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 F2RP25116 425 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 GNB1P62873 340 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 BEAN1Q3B7T3 259 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 IDO2Q6ZQW0 420 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
MRPL28-201ENST00000199706 WIPF1O43516 503 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 CD3DP04234 171 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 IL6RP08887 468 aaPredicted RBP13.53□□□□□ -0.24
MRPL28-201ENST00000199706 DGCR2P98153 550 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 MEF2DQ14814 521 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 ASPHD1Q5U4P2 390 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 OR51H1Q8NH63 302 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 DGCR14Q96DF8 476 aaKnown RBP13.53□□□□□ -0.24
MRPL28-201ENST00000199706 GPHA2Q96T91 129 aa13.53□□□□□ -0.24
MRPL28-201ENST00000199706 CCDC160A6NGH7 325 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 RLN1P04808 185 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 LGALS1P09382 135 aaKnown RBP13.52□□□□□ -0.25
MRPL28-201ENST00000199706 OR8U8P0C7N1 319 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 TNFSF8P32971 234 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 ECI1P42126 302 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 RND3P61587 244 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 IL18Q14116 193 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 TNXAQ16473 311 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 OR4A47Q6IF82 309 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 TINAGL1Q9GZM7 467 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-201ENST00000199706 GNB4Q9HAV0 340 aa13.52□□□□□ -0.25
MRPL28-201ENST00000199706 A0A0G2JLM5 398 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 G3V4G9 280 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 M0QYG6 137 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 PTBP1P26599 531 aaKnown RBP eCLIP13.51□□□□□ -0.25
MRPL28-201ENST00000199706 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
MRPL28-201ENST00000199706 STEAP1BQ6NZ63 245 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 SLC25A42Q86VD7 318 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 ADAD2Q8NCV1 583 aaKnown RBP13.51□□□□□ -0.25
MRPL28-201ENST00000199706 SRSF8Q9BRL6 282 aaKnown RBP13.51□□□□□ -0.25
MRPL28-201ENST00000199706 SLC2A9Q9NRM0 540 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
MRPL28-201ENST00000199706 MSGN1A6NI15 193 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 RAB3DO95716 219 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 OR9G9P0C7N8 305 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 HLA-GP17693 338 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 TPPP2P59282 170 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 DEFA6Q01524 100 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 ZNF616Q08AN1 781 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 SURF2Q15527 256 aaPredicted RBP13.5□□□□□ -0.25
MRPL28-201ENST00000199706 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 THOC7Q6I9Y2 204 aaKnown RBP13.5□□□□□ -0.25
MRPL28-201ENST00000199706 TTC9CQ8N5M4 171 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 TERB2Q8NHR7 220 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 PHB2Q99623 299 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
MRPL28-201ENST00000199706 FABP12A6NFH5 140 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 B3GALNT1O75752 331 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 S1PR2O95136 353 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 TRGV3P03979 118 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 RPL27AP46776 148 aaKnown RBP13.49□□□□□ -0.25
MRPL28-201ENST00000199706 ERVK-16P61578 105 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 OXLD1Q5BKU9 147 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
MRPL28-201ENST00000199706 OR11H1Q8NG94 326 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 SLC2A8Q9NY64 477 aa13.49□□□□□ -0.25
MRPL28-201ENST00000199706 PRKDCP78527 4128 aaKnown RBP13.48□□□□□ -0.25
MRPL28-201ENST00000199706 ANKRD20A5PA0PJZ0 165 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 FAM223BA6NKX1 122 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 TEX22C9J3V5 150 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 UPK2O00526 184 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 MPPED1O15442 326 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 AKAIN1P0CW23 69 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 IGLL1P15814 213 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 RPA2P15927 270 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 S100A5P33763 92 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 EGFEM1PQ0D2K5 195 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 FAM209BQ5JX69 171 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 FAM223AQ8IWN6 122 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 OR4D10Q8NGI6 311 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 OR1N2Q8NGR9 330 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms