RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 LY6EQ16553 131 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 C4orf46Q504U0 113 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 LIAT1Q6ZQX7 453 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 LYG2Q86SG7 212 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 MINDY2Q8NBR6 621 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 CHPT1Q8WUD6 406 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 HARBI1Q96MB7 349 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 RBM14Q96PK6 669 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 BEX1Q9HBH7 125 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 SHOXO15266 292 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 OR2F2O95006 317 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 S1PR2O95136 353 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 CDS2O95674 445 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 HLA-AP01891 365 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 IL5P05113 134 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 RNASE1P07998 156 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 TRIM16LQ309B1 348 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 C16orf82Q7Z2V1 217 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 NPBQ8NG41 125 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 TSNAXQ99598 290 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 PLSCR3Q9NRY6 295 aa15.83■□□□□ 0.12
PDLIM2-221ENST00000622702 SRRM4A7MD48 611 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 PRAF2O60831 178 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 SPDEFO95238 335 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 HRASP01112 189 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 IGLV2-23P01705 113 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 SRPXP78539 464 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 POU2AF1Q16633 256 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 TMEM219Q86XT9 240 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 TMEM56Q96MV1 263 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 AIFM2Q9BRQ8 373 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 CHIAQ9BZP6 476 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 C1RLQ9NZP8 487 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 TMEM56-RWDD3S4R434 201 aa15.82■□□□□ 0.12
PDLIM2-221ENST00000622702 NDUFA3O95167 84 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 DUS4LO95620 317 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 DHFRP00374 187 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 IGKV1-39P01597 117 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 IGKV1D-39P04432 117 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 NQO2P16083 231 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 F2RL1P55085 397 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 MMDQ15546 238 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 IL22RA2Q969J5 263 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 SLC25A33Q9BSK2 321 aa15.81■□□□□ 0.12
PDLIM2-221ENST00000622702 NBR2O15453 112 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 CNTFRP26992 372 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 UBE2KP61086 200 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 PSG5Q15238 335 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 CADM3Q8N126 398 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 LRTM2Q8N967 370 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 LHFPL5Q8TAF8 219 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 RBPMSQ93062 196 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 RHOVQ96L33 236 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 RAB18Q9NP72 206 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 MOB4Q9Y3A3 225 aa15.8■□□□□ 0.12
PDLIM2-221ENST00000622702 PIGBOS1A0A0B4J2F0 54 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 RRHO14718 337 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 FGF16O43320 207 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 CHST1O43916 411 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 ANKRD55Q3KP44 614 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 SELENOHQ8IZQ5 122 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 LGI3Q8N145 548 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 OR52B4Q8NGK2 314 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 ZNF431Q8TF32 576 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 CASTOR1Q8WTX7 329 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 MITD1Q8WV92 249 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 R3HDM4Q96D70 268 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 SEC22AQ96IW7 307 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 SEC22CQ9BRL7 303 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 PRR13Q9NZ81 148 aa15.79■□□□□ 0.12
PDLIM2-221ENST00000622702 MARCH11A6NNE9 402 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 NCBP2LA6PVI3 153 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 M0QZK8 103 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 ATG12O94817 140 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 CRYGBP07316 175 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 SAA1P0DJI8 122 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 ERVK-16P61578 105 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 VMA21Q3ZAQ7 101 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 TMEM268Q5VZI3 342 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 ZNF695Q8IW36 515 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 FAM71E2Q8N5Q1 922 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 Q8N9W7 124 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 GPN1Q9HCN4 374 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 KIAA1456Q9P272 454 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 A0A0B4J2A0 478 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 SNRPGP15A8MWD9 76 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 SLC25A17O43808 307 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 GPR137BO60478 399 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 KRASP01116 189 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 C5orf64Q2M2E5 130 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 VKORC1L1Q8N0U8 176 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 PUSL1Q8N0Z8 303 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 C5orf56Q8N8D9 126 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 TEX45Q8NA69 505 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 COQ8AQ8NI60 647 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 VSTM2AQ8TAG5 236 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 SHPKQ9UHJ6 478 aa15.78■□□□□ 0.12
PDLIM2-221ENST00000622702 C7orf66A4D0T2 115 aa15.77■□□□□ 0.11
PDLIM2-221ENST00000622702 FAM181BA6NEQ2 426 aa15.77■□□□□ 0.11
PDLIM2-221ENST00000622702 IGKV1-5P01602 117 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms