RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 AADACP22760 399 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 BRWD1-AS2P59051 145 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 CDK10Q15131 360 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 OVCH2Q7RTZ1 564 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 HOGA1Q86XE5 327 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 VKORC1L1Q8N0U8 176 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 ADAD2Q8NCV1 583 aaKnown RBP13.16□□□□□ -0.3
HMGN3-203ENST00000620514 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 OR4C12Q96R67 309 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 SPATA2Q9UM82 520 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 PRELID3BQ9Y3B1 194 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 MPPED1O15442 326 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 BRI3O95415 125 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 PRH1P02810 166 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 OR9G9P0C7N8 305 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-203ENST00000620514 GP9P14770 177 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 ARPC4P59998 168 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 MFSD4AQ8N468 514 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
HMGN3-203ENST00000620514 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 TAS2R8Q9NYW2 309 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 ADAM30Q9UKF2 790 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
HMGN3-203ENST00000620514 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
HMGN3-203ENST00000620514 A0A0A6YYH2 397 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 MEIS3P1A6NDR6 274 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 A6NJ64 397 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 ZP3P21754 424 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 FCGR2CP31995 323 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
HMGN3-203ENST00000620514 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 SECTM1Q8WVN6 248 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 YIPF6Q96EC8 236 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 RSRP1Q9BUV0 290 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 U3KQK5 164 aa13.14□□□□□ -0.31
HMGN3-203ENST00000620514 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 TNFSF12O43508 249 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 AIREO43918 545 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 ACTL6BO94805 426 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 RPS19P39019 145 aaKnown RBP13.13□□□□□ -0.31
HMGN3-203ENST00000620514 ZNF45Q02386 682 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
HMGN3-203ENST00000620514 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 OR13F1Q8NGS4 319 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 OR4S2Q8NH73 311 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 AKIP1Q9NQ31 210 aa13.13□□□□□ -0.31
HMGN3-203ENST00000620514 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
HMGN3-203ENST00000620514 HMX3A6NHT5 357 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 OR2A4O95047 310 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 PPYP01298 95 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 RHOGP84095 191 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 TIMM50Q3ZCQ8 353 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 IL34Q6ZMJ4 242 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 ZNF66Q6ZN08 573 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 C19orf35Q6ZS72 473 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 PUSL1Q8N0Z8 303 aaKnown RBP13.12□□□□□ -0.31
HMGN3-203ENST00000620514 OR2A7Q96R45 310 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
HMGN3-203ENST00000620514 A0A087WXM4 84 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 E7EUB6 86 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 XRCC3O43542 346 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
HMGN3-203ENST00000620514 KBTBD11O94819 623 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 IGLV1-51P01701 117 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 FXYD4P59646 89 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 SSX9Q7RTT3 188 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 TMEM167AQ8TBQ9 72 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 SPIN2AQ99865 258 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 SLC5A7Q9GZV3 580 aa13.11□□□□□ -0.31
HMGN3-203ENST00000620514 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
HMGN3-203ENST00000620514 KMT2CQ8NEZ4 4911 aaKnown RBP13.1□□□□□ -0.31
HMGN3-203ENST00000620514 TRBV9A0A0B4J1U6 114 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 A0A1B0GW64 132 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 TMEM127O75204 238 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
HMGN3-203ENST00000620514 MYOD1P15172 320 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 CBX5P45973 191 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 EXOSC2Q13868 293 aaKnown RBP13.1□□□□□ -0.31
HMGN3-203ENST00000620514 ANKRD13BQ86YJ7 626 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 OR9G4Q8NGQ1 327 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
HMGN3-203ENST00000620514 OR2J3O76001 311 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 TNFAIP8O95379 198 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 FRMD6-AS1P0C7T7 363 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms