RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 DYNLRB1Q9NP97 96 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 TMEM106BQ9NUM4 274 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 KAAG1Q9UBP8 84 aa9.85□□□□□ -0.83
USP6NL-206ENST00000609853 POLEQ07864 2286 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 UBE2L5PA0A1B0GUS4 154 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 E7EQL1 145 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 C17orf112F2Z3M2 114 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 TNFRSF13BO14836 293 aaPredicted RBP9.84□□□□□ -0.83
USP6NL-206ENST00000609853 ARG1P05089 322 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 NFYBP25208 207 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 TAGLN2P37802 199 aaKnown RBP9.84□□□□□ -0.83
USP6NL-206ENST00000609853 RPL31P62899 125 aaKnown RBP9.84□□□□□ -0.83
USP6NL-206ENST00000609853 RELBQ01201 579 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 DUX4L9Q6RFH8 374 aaPredicted RBP9.84□□□□□ -0.83
USP6NL-206ENST00000609853 HEPN1Q6WQI6 88 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 LYG1Q8N1E2 194 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 C8orf31Q8N9H6 132 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 PLPPR2Q96GM1 343 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 TMEM140Q9NV12 185 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 RAXQ9Y2V3 346 aa9.84□□□□□ -0.83
USP6NL-206ENST00000609853 MED19A0JLT2 244 aaPredicted RBP9.83□□□□□ -0.84
USP6NL-206ENST00000609853 NDUFB3O43676 98 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 MPDU1O75352 247 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
USP6NL-206ENST00000609853 FSTL3O95633 263 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 IFNA1P01562 189 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 RTL8BQ17RB0 113 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
USP6NL-206ENST00000609853 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 ZDHHC16Q969W1 377 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 RCC1LQ96I51 464 aaKnown RBP9.83□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF714Q96N38 554 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 RARRES2Q99969 163 aa9.83□□□□□ -0.84
USP6NL-206ENST00000609853 FOXA2Q9Y261 457 aaPredicted RBP9.83□□□□□ -0.84
USP6NL-206ENST00000609853 YLPM1P49750 1951 aaKnown RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 A0A1B0GV50 99 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 C15orf62A8K5M9 175 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 SRP19P09132 144 aaKnown RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 MDKP21741 143 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 FGF7P21781 194 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 VDAC2P45880 294 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 ATP5IP56385 69 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 RAB11AP62491 216 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 ICAM4Q14773 271 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 HFEQ30201 348 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF787Q6DD87 383 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 FAM71F2Q6NXP2 309 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 CCL17Q92583 94 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 RHOVQ96L33 236 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 P2RX4Q99571 388 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 CISD1Q9NZ45 108 aaKnown RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 LOC102723971A0A1B0GUV8 181 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 OR13C7P0DN81 318 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 HSPE1P61604 102 aaKnown RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 HAGHQ16775 308 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 AWAT1Q58HT5 328 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 RBMS3Q6XE24 437 aaKnown RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF833PQ6ZTB9 187 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 TGIF2LYQ8IUE0 185 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF383Q8NA42 475 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 HEYLQ9NQ87 328 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-206ENST00000609853 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 SLC39A9Q9NUM3 307 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 DCAF16Q9NXF7 216 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 FKBP11Q9NYL4 201 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 PRNDQ9UKY0 176 aa9.82□□□□□ -0.84
USP6NL-206ENST00000609853 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.81□□□□□ -0.84
USP6NL-206ENST00000609853 C7orf77A4D0Y5 90 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 M0R036 132 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 CCL21O00585 134 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 IFNA10P01566 189 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 BCL2P10415 239 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 OR2B8PP59922 312 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 OR4A47Q6IF82 309 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 FAM122CQ6P4D5 195 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
USP6NL-206ENST00000609853 SSX9Q7RTT3 188 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 ZCCHC24Q8N2G6 241 aaKnown RBP9.81□□□□□ -0.84
USP6NL-206ENST00000609853 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 NPCDR1Q9BY65 106 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 TCF19Q9Y242 345 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 ZNF257Q9Y2Q1 563 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 NBEAQ8NFP9 2946 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 ARFGEF3Q5TH69 2177 aa9.81□□□□□ -0.84
USP6NL-206ENST00000609853 TRBV23-1A0A0A0MS06 115 aa9.8□□□□□ -0.84
USP6NL-206ENST00000609853 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
USP6NL-206ENST00000609853 CTXND1A0A1B0GTU2 59 aa9.8□□□□□ -0.84
USP6NL-206ENST00000609853 A0A1W2PPE3 182 aa9.8□□□□□ -0.84
USP6NL-206ENST00000609853 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms