RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 SAP30O75446 220 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 FCGR2CP31995 323 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 HRH1P35367 487 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 RFX2P48378 723 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 INPP1P49441 399 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 RAB9AP51151 201 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF137PP52743 207 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 SLURP1P55000 103 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF79Q15937 498 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 RNASE10Q5GAN6 216 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 TMEM65Q6PI78 240 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 H1FOOQ8IZA3 346 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 GDPD1Q8N9F7 314 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 TOLLIPQ9H0E2 274 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF221Q9UK13 617 aa12.7□□□□□ -0.38
SHKBP1-215ENST00000597649 J3QRK9 145 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 OR8U9P0C7N5 309 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 TBPP20226 339 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 CNTFRP26992 372 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 TPSG1Q9NRR2 321 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 PIPOXQ9P0Z9 390 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 RNF150Q9ULK6 438 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 OR2W1Q9Y3N9 320 aa12.69□□□□□ -0.38
SHKBP1-215ENST00000597649 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 M0QYG6 137 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 RAB29O14966 203 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 ATP6V0E1O15342 81 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 RAB3DO95716 219 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 CD3DP04234 171 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 AP3S2P59780 193 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 HERV-K104P61576 105 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 DYRK1AQ13627 763 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 TRIQKQ629K1 86 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 Q8N1Y9 231 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 TOMM5Q8N4H5 51 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 MINDY2Q8NBR6 621 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 OR6F1Q8NGZ6 308 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 GIMAP1Q8WWP7 306 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 ABHD14BQ96IU4 210 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 OR51J1Q9H342 316 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 RBMX2Q9Y388 322 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-215ENST00000597649 FRAS1Q86XX4 4008 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 SOX15O60248 233 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 AKAIN1P0CW23 69 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 AADACP22760 399 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 LSAMPQ13449 338 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF846Q147U1 533 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 MEF2DQ14814 521 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 MMDQ15546 238 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF57Q68EA5 555 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 ACSM6Q6P461 480 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 CASTOR1Q8WTX7 329 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 ARPC1AQ92747 370 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF2Q9BSG1 426 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 WDR12Q9GZL7 423 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 OR2D2Q9H210 308 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 IFI27L2Q9H2X8 130 aa12.67□□□□□ -0.38
SHKBP1-215ENST00000597649 TRAV41A0A0B4J266 112 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 ANKRD20A5PA0PJZ0 165 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 DISC1C4P0D8 188 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 TXNL1O43396 289 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 LANCL1O43813 399 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 PPYP01298 95 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 FAUP35544 74 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 FXYD4P59646 89 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 HAPLN4Q86UW8 402 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 MFSD4AQ8N468 514 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 TNCP24821 2201 aa12.66□□□□□ -0.38
SHKBP1-215ENST00000597649 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 LINC01619G3V211 115 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 TUSC2O75896 110 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 SLC22A5O76082 557 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 HLA-DRB1P01911 266 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 CD74P04233 296 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 SECTM1Q8WVN6 248 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 AGMATQ9BSE5 352 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 KRTAP17-1Q9BYP8 105 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 SLC5A7Q9GZV3 580 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 FBXO7Q9Y3I1 522 aa12.65□□□□□ -0.38
SHKBP1-215ENST00000597649 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 A0A087WW49 117 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 PPP5CP53041 499 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 NDPQ00604 133 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 BAK1Q16611 211 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms