RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TRIM16LQ309B1 348 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 CENPVQ7Z7K6 275 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-215ENST00000584944 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 Q8N9W7 124 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 RNASE11Q8TAA1 199 aaKnown RBP11.02□□□□□ -0.65
TRAF4-215ENST00000584944 DDB2Q92466 427 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 RITA1Q96K30 269 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 SLC25A21Q9BQT8 299 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-215ENST00000584944 C7orf50Q9BRJ6 194 aaKnown RBP11.02□□□□□ -0.65
TRAF4-215ENST00000584944 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 SIGLEC9Q9Y336 463 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.65
TRAF4-215ENST00000584944 AP4M1O00189 453 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 MPPED1O15442 326 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 B3GALNT1O75752 331 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 HPRT1P00492 218 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 ZNF735P0CB33 412 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 AKR1C4P17516 323 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 UBE2KP61086 200 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 FBLN7Q53RD9 439 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 MZT2BQ6NZ67 158 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 SSX9Q7RTT3 188 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 TMED4Q7Z7H5 227 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 SGPP2Q8IWX5 399 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 FAM71E2Q8N5Q1 922 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 RBMXL1Q96E39 390 aaKnown RBP11.01□□□□□ -0.65
TRAF4-215ENST00000584944 RHOVQ96L33 236 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 PLSCR3Q9NRY6 295 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 KCNIP3Q9Y2W7 256 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 MMP24Q9Y5R2 645 aa11.01□□□□□ -0.65
TRAF4-215ENST00000584944 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 RAMP3O60896 148 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 NDUFA3O95167 84 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 HLA-DRB1P01911 266 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 ANXA3P12429 323 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 NQO2P16083 231 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 VDAC1P21796 283 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 LPAR6P43657 344 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 TAS2R31P59538 309 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 DEFA1P59665 94 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 DEFA3P59666 94 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 RND3P61587 244 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 RBMS2Q15434 407 aaKnown RBP11□□□□□ -0.65
TRAF4-215ENST00000584944 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 Q8N2B8 174 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 TEX45Q8NA69 505 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 CHPT1Q8WUD6 406 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 ZNF747Q9BV97 191 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 COMMD9Q9P000 198 aa11□□□□□ -0.65
TRAF4-215ENST00000584944 PIGBOS1A0A0B4J2F0 54 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 H0Y980 276 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 LYRM1O43325 122 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 RBMXL2O75526 392 aaKnown RBP10.99□□□□□ -0.65
TRAF4-215ENST00000584944 SNAPC5O75971 98 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 OR2A4O95047 310 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 AMY1AP04745 511 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 TMEM267Q0VDI3 215 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-215ENST00000584944 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-215ENST00000584944 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 VKORC1L1Q8N0U8 176 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 GRPEL2Q8TAA5 225 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 OR2A7Q96R45 310 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 PHB2Q99623 299 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 OR51J1Q9H342 316 aa10.99□□□□□ -0.65
TRAF4-215ENST00000584944 PSMB11A5LHX3 300 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 S1PR2O95136 353 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 CA2P00918 260 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 KRASP01116 189 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 IGHG2P01859 326 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-215ENST00000584944 RPA2P15927 270 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 VAMP1P23763 118 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 CCR6P51684 374 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 AKR1C2P52895 323 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 FXYD3Q14802 87 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 TNXAQ16473 311 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 CENPSQ8N2Z9 138 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 OR4X2Q8NGF9 303 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 SDHCQ99643 169 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-215ENST00000584944 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-215ENST00000584944 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
TRAF4-215ENST00000584944 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 UPK1BO75841 260 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 KBTBD11O94819 623 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 RAB25P57735 213 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 CX3CL1P78423 397 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 SRPXP78539 464 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 DHODHQ02127 395 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 TMEM65Q6PI78 240 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms