RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ABCC11Q96J66 1382 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 IGHV3-64A0A075B6Q5 118 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 TRGV2A0A075B6R0 118 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 LRRN3E7EW58 273 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 M0QZ92 97 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 COCHO43405 550 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 C8orf88P0DMB2 117 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 COX5BP10606 129 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 MYL12AP19105 171 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 BLVRAP53004 296 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 AP2S1P53680 142 aaPredicted RBP1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 CXCR4P61073 352 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 GLO1Q04760 184 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 BATFQ16520 125 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 TMEM42Q69YG0 159 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 LYZL1Q6UWQ5 148 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 RIBC1Q8N443 379 aaPredicted RBP1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 DAND5Q8N907 189 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 ANKRD36BP1Q96IX9 119 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 FKBP14Q9NWM8 211 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 POLR1DQ9Y2S0 133 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 PTPRSQ13332 1948 aa1.24□□□□□ -2.21
PPP4R1-227ENST00000583988 RGS12O14924 1447 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 TMSB15BA0A087X1C1 80 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 C9JCJ5 164 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 H0Y980 276 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 APOMO95445 188 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 NAPSAO96009 420 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 TYMSP04818 313 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 CXCL2P19875 107 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 CXCL3P19876 107 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 PSMB8P28062 276 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 FXYD7P58549 80 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 TAS2R20P59543 309 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 AP1S1P61966 158 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 MLLT11Q13015 90 aaPredicted RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 PTRHD1Q6GMV3 140 aaKnown RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 LRRN1Q6UXK5 716 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 SPATA12Q7Z6I5 190 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 NAA40Q86UY6 237 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 C12orf43Q96C57 262 aaKnown RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 NAA38Q9BRA0 125 aaKnown RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 MRPS26Q9BYN8 205 aaKnown RBP1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 DERL2Q9GZP9 239 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 PARVGQ9HBI0 331 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 XAGE1AQ9HD64 81 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 C8orf4Q9NR00 106 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 TAAR3PQ9P1P4 343 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
PPP4R1-227ENST00000583988 ABCC12Q96J65 1359 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 MAP3K5Q99683 1374 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 TXNDC9O14530 226 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 NIPSNAP2O75323 286 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 AHSA1O95433 338 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 HLA-DQB2P05538 268 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 BPGMP07738 259 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 IL3P08700 152 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 ALDH3A1P30838 453 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 TMEM258P61165 79 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 AKR1C1Q04828 323 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 PPP1R1AQ13522 171 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 MIAQ16674 131 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 FAM78BQ5VT40 261 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 RASSF6Q6ZTQ3 369 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 COA5Q86WW8 74 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 ASB17Q8WXJ9 295 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC7A6Q92536 515 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 RNASE6Q93091 150 aaKnown RBP1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 TESCQ96BS2 214 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 TMEM109Q9BVC6 243 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 SPZ1Q9BXG8 430 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 OR51I2Q9H344 312 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 MAP1LC3AQ9H492 121 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 AMMECR1Q9Y4X0 333 aaPredicted RBP1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 C9orf84Q5VXU9 1444 aa1.22□□□□□ -2.21
PPP4R1-227ENST00000583988 MDFIC2A0A1B0GVS7 189 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 CXCR6O00574 342 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 ACOX3O15254 700 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 C1QCP02747 245 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 ANGP03950 147 aaKnown RBP1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 ISG15P05161 165 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 UCHL3P15374 230 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 ZNF791Q3KP31 576 aaPredicted RBP1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 CDKL4Q5MAI5 379 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 LPCAT4Q643R3 524 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 C5orf46Q6UWT4 87 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 HIST2H3AQ71DI3 136 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 COMMD7Q86VX2 200 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 TMEM156Q8N614 296 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 UBL4BQ8N7F7 174 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 OR8B12Q8NGG6 310 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 OR13C8Q8NGS7 320 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 ZNF675Q8TD23 568 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 EEF1AKMT1Q8WVE0 214 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 SFRP2Q96HF1 295 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 CCL13Q99616 98 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 DOHHQ9BU89 302 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 FAM96AQ9H5X1 160 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms