RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	SPIN2A	Q99865	258 aa		13.43	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SPIN2B	Q9BPZ2	258 aa		13.43	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	CYSRT1	A8MQ03	144 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	ADAP1	O75689	374 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	LY6G6D	O95868	133 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	MOS	P00540	346 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SNRNP70	P08621	437 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SLC25A6	P12236	298 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	G6PC	P35575	357 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	LGALS7	P47929	136 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780		Q8N6K4	173 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	OR2T10	Q8NGZ9	312 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	ASB13	Q8WXK3	278 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	RRNAD1	Q96FB5	475 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	RHOV	Q96L33	236 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	TSNAX	Q99598	290 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	MMP24	Q9Y5R2	645 aa		13.42	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780		A0A0G2JRQ6	117 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	CCS	O14618	274 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	KRAS	P01116	189 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	IGLV2-23	P01705	113 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	FAM106CP	P0CH98	169 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SAA1	P0DJI8	122 aa	Predicted RBP	13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SRP14	P37108	136 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	C2orf68	Q2NKX9	166 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	TUSC1	Q2TAM9	212 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	DMBX1	Q8NFW5	382 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	VSTM2A	Q8TAG5	236 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	EAF1	Q96JC9	268 aa	Predicted RBP	13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	TMEM140	Q9NV12	185 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	BET1L	Q9NYM9	111 aa		13.41	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	NAV3	Q8IVL0	2385 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	CXCL3	P19876	107 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	UBE2K	P61086	200 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	RPS16	P62249	146 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SCGB2A2	Q13296	93 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	HES1	Q14469	280 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	DEFB112	Q30KQ8	113 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	VMA21	Q3ZAQ7	101 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	THOC7	Q6I9Y2	204 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	CLEC9A	Q6UXN8	241 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	GSG1L	Q6UXU4	331 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	IL17REL	Q6ZVW7	336 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	H2BFWT	Q7Z2G1	175 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	PUSL1	Q8N0Z8	303 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SMR3A	Q99954	134 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	PRDM13	Q9H4Q3	707 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	COA4	Q9NYJ1	87 aa		13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SOX21	Q9Y651	276 aa	Predicted RBP	13.4	□□□□□ -0.26
CDK5RAP3-215	ENST00000579780	SRRM4	A7MD48	611 aa	Known RBP	13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	NDUFA3	O95167	84 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	GIP	P09681	153 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	TMEM11	P17152	192 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	H2BFS	P57053	126 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	SRSF4	Q08170	494 aa	Known RBP	13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR4A47	Q6IF82	309 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	FOXRED2	Q8IWF2	684 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	BCL6B	Q8N143	479 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR8H1	Q8NGG4	311 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR4A5	Q8NH83	315 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	GPR146	Q96CH1	333 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	SSX3	Q99909	188 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	TCF19	Q9Y242	345 aa		13.39	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780		A0A1B0GU03	582 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	MDFIC2	A0A1B0GVS7	189 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	C5orf51	A6NDU8	294 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	MPTX1	A8MV57	137 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	FAM25E	A8MYX2	175 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	NBR2	O15453	112 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	KBTBD11	O94819	623 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	IL6R	P08887	468 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	FGF2	P09038	288 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	SMCO1	Q147U7	214 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	MMD	Q15546	238 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	IAH1	Q2TAA2	248 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	SSX9	Q7RTT3	188 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	VKORC1L1	Q8N0U8	176 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	NPB	Q8NG41	125 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	PIFO	Q8TCI5	191 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR10C1	Q96KK4	312 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	PDCD10	Q9BUL8	212 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	CACNG5	Q9UF02	275 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	CDC42EP3	Q9UKI2	254 aa		13.38	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780		H3BUX3	64 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	SLC25A17	O43808	307 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR2A4	O95047	310 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	CD24	P25063	80 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	PSG5	Q15238	335 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	AARD	Q4LEZ3	155 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	FBLN7	Q53RD9	439 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	AKAP14	Q86UN6	197 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	TEX45	Q8NA69	505 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	OR5R1	Q8NH85	324 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	TMEM167A	Q8TBQ9	72 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	C22orf15	Q8WYQ4	148 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	RBMXL1	Q96E39	390 aa	Known RBP	13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	RITA1	Q96K30	269 aa		13.37	□□□□□ -0.27
CDK5RAP3-215	ENST00000579780	C2orf50	Q96LR7	162 aa		13.37	□□□□□ -0.27

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